STRINGSTRING
UMN179_02396 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02396" - Hypothetical protein in Gallibacterium anatis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02396Hypothetical protein (41 aa)    
Predicted Functional Partners:
UMN179_02399
Prophage minor tail protein Z (175 aa)
              0.829
UMN179_02398
Hypothetical protein (101 aa)
              0.829
UMN179_02397
Hypothetical protein (107 aa)
              0.829
UMN179_02401
Hypothetical protein (217 aa)
              0.816
UMN179_02400
Phage minor tail protein U (136 aa)
              0.816
UMN179_02402
Hypothetical protein (122 aa)
              0.552
UMN179_02395
ATP-dependent Clp protease proteolytic subunit (654 aa)
              0.552
UMN179_02394
Hypothetical protein (117 aa)
              0.544
UMN179_02393
Hypothetical protein (403 aa)
              0.539
UMN179_02392
Phage portal protein, lambda family (500 aa)
              0.492
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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