STRINGSTRING
UMN179_02416 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02416" - Hypothetical protein in Gallibacterium anatis
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02416Hypothetical protein (244 aa)    
Predicted Functional Partners:
UMN179_02417
Bacteriophage lambda tail assembly protein I (196 aa)
 
   
  0.993
UMN179_02418
Phage-like protein, tail component (2124 aa)
 
   
  0.985
UMN179_02413
Phage minor tail protein L (238 aa)
 
   
  0.951
UMN179_02412
Phage minor tail protein (108 aa)
 
        0.948
UMN179_02366
DNA N-6-adenine-methyltransferase (184 aa)
   
        0.769
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA (156 aa)
     
    0.754
UMN179_02387
Phage terminase large subunit (706 aa)
 
          0.731
UMN179_02397
Hypothetical protein (107 aa)
 
          0.729
UMN179_02392
Phage portal protein, lambda family (500 aa)
 
          0.722
UMN179_02395
ATP-dependent Clp protease proteolytic subunit (654 aa)
 
          0.690
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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