STRINGSTRING
UMN179_02426 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02426" - Integrase in Gallibacterium anatis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02426Integrase (169 aa)    
Predicted Functional Partners:
UMN179_00240
Integrase (152 aa)
 
          0.853
topA
DNA topoisomerase I; Releases the supercoiling and torsional tension of DNA, which is introduced during the DNA replication and transcription, by transiently cleaving and rejoining one strand of the DNA duplex. Introduces a single-strand break via transesterification at a target site in duplex DNA. The scissile phosphodiester is attacked by the catalytic tyrosine of the enzyme, resulting in the formation of a DNA-(5’-phosphotyrosyl)-enzyme intermediate and the expulsion of a 3’-OH DNA strand. The free DNA strand then undergoes passage around the unbroken strand, thus removing DNA super [...] (868 aa)
   
   
  0.628
UMN179_02427
Hypothetical protein (94 aa)
              0.552
UMN179_02425
Putative transposase (367 aa)
         
  0.549
UMN179_01207
EcoKI restriction-modification system protein HsdS (414 aa)
 
   
  0.539
UMN179_00964
EcoKI restriction-modification system protein HsdS (390 aa)
   
   
  0.473
UMN179_00957
Type I restriction modification DNA specificity domain-containing protein (361 aa)
   
   
  0.473
UMN179_00644
EcoKI restriction-modification system protein HsdS (440 aa)
   
   
  0.473
UMN179_02428
Hypothetical protein (78 aa)
              0.465
UMN179_01231
DNA protecting protein DprA (398 aa)
 
          0.442
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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