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UMN179_02485 protein (Gallibacterium anatis) - STRING interaction network
"UMN179_02485" - Phage capsid scaffolding protein in Gallibacterium anatis
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
UMN179_02485Phage capsid scaffolding protein (283 aa)    
Predicted Functional Partners:
UMN179_02486
Phage major capsid protein, P2 family (337 aa)
 
          0.959
UMN179_02487
Phage small terminase subunit (267 aa)
 
          0.948
UMN179_02490
Phage virion morphogenesis family (217 aa)
 
          0.930
UMN179_02482
Phage portal protein (339 aa)
 
          0.928
UMN179_02483
Terminase (597 aa)
 
          0.923
UMN179_02491
Hypothetical protein (376 aa)
 
          0.922
UMN179_02492
Hypothetical protein (151 aa)
 
          0.921
UMN179_02484
Hypothetical protein (41 aa)
              0.859
UMN179_02499
Phage-related minor tail protein (834 aa)
 
          0.858
UMN179_02501
Baseplate J-like protein (395 aa)
 
          0.856
Your Current Organism:
Gallibacterium anatis
NCBI taxonomy Id: 1005058
Other names: G. anatis, G. anatis UMN179, Gallibacterium, Gallibacterium Christensen et al. 2003 emend. Bisgaard et al. 2009, Gallibacterium anatis, Gallibacterium anatis UMN179, Gallibacterium anatis str. UMN179, Gallibacterium anatis strain UMN179, Pasteurella anatis, Salpingitia sp. 10672/6, Salpingitia sp. 10672/9, Salpingitia sp. 12158, Salpingitia sp. 20558, Salpingitia sp. 36961/sv7, Salpingitia sp. BJ3453, Salpingitia sp. BK3387.2, Salpingitia sp. CCM 5995, Salpingitia sp. Gerl.220, Salpingitia sp. Gerl.3348/80, Salpingitia sp. Gerl.4224, Salpingitia sp. IPDH 697/78, avian Pasteurella haemolytica complex
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