STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PT7_0307Type IV secretion system protein VirB9. (270 aa)    
Predicted Functional Partners:
PT7_0306
Type IV secretion system protein VirB10.
 
 
 0.999
PT7_1779
Type IV secretion system protein VirB10.
 
 
 0.996
PT7_2204
TraH protein.
 
 
 0.992
PT7_0310
Type IV secretion system protein VirB8.
 
  
 0.980
PT7_0318
Type IV secretion system protein VirB4.
 
  
 0.974
PT7_1772
Type IV secretion system protein VirB4.
 
  
 0.974
PT7_1777
Type IV secretion system protein VirB8.
 
  
 0.917
PT7_1778
Type IV secretion system protein VirB9.
  
  
 
0.907
PT7_1775
Type IV secretion system protein VirB6.
 
 
 0.885
PT7_1780
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
 
  
 0.849
Your Current Organism:
Pusillimonas sp. T77
NCBI taxonomy Id: 1007105
Other names: P. sp. T7-7, Pusillimonas sp. T7-7
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.