Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
PT7_0425 | PT7_2249 | PT7_0425 | PT7_2249 | Type II citrate synthase; Belongs to the citrate synthase family. | Citrate synthase. | 0.900 |
PT7_0425 | PT7_3136 | PT7_0425 | PT7_3136 | Type II citrate synthase; Belongs to the citrate synthase family. | Glutamate synthase [NADPH] large chain precursor. | 0.883 |
PT7_0425 | glcB | PT7_0425 | PT7_2988 | Type II citrate synthase; Belongs to the citrate synthase family. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.979 |
PT7_0425 | mdh | PT7_0425 | PT7_0418 | Type II citrate synthase; Belongs to the citrate synthase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.992 |
PT7_0425 | ppc | PT7_0425 | PT7_3476 | Type II citrate synthase; Belongs to the citrate synthase family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.822 |
PT7_1043 | PT7_1561 | PT7_1043 | PT7_1561 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.929 |
PT7_1043 | PT7_3136 | PT7_1043 | PT7_3136 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Glutamate synthase [NADPH] large chain precursor. | 0.617 |
PT7_1043 | eno | PT7_1043 | PT7_1654 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.934 |
PT7_1043 | mdh | PT7_1043 | PT7_0418 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.438 |
PT7_1043 | ppc | PT7_1043 | PT7_3476 | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.928 |
PT7_1561 | PT7_1043 | PT7_1561 | PT7_1043 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate synthase; Catalyzes the phosphorylation of pyruvate to phosphoenolpyruvate; Belongs to the PEP-utilizing enzyme family. | 0.929 |
PT7_1561 | PT7_3136 | PT7_1561 | PT7_3136 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Glutamate synthase [NADPH] large chain precursor. | 0.777 |
PT7_1561 | eno | PT7_1561 | PT7_1654 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphopyruvate hydratase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.992 |
PT7_1561 | mdh | PT7_1561 | PT7_0418 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.771 |
PT7_1561 | ppc | PT7_1561 | PT7_3476 | Pyruvate kinase; Belongs to the pyruvate kinase family. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.928 |
PT7_2249 | PT7_0425 | PT7_2249 | PT7_0425 | Citrate synthase. | Type II citrate synthase; Belongs to the citrate synthase family. | 0.900 |
PT7_2249 | PT7_3136 | PT7_2249 | PT7_3136 | Citrate synthase. | Glutamate synthase [NADPH] large chain precursor. | 0.883 |
PT7_2249 | glcB | PT7_2249 | PT7_2988 | Citrate synthase. | Malate synthase G; Involved in the glycolate utilization. Catalyzes the condensation and subsequent hydrolysis of acetyl-coenzyme A (acetyl- CoA) and glyoxylate to form malate and CoA; Belongs to the malate synthase family. GlcB subfamily. | 0.967 |
PT7_2249 | mdh | PT7_2249 | PT7_0418 | Citrate synthase. | Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family. | 0.982 |
PT7_2249 | ppc | PT7_2249 | PT7_3476 | Citrate synthase. | Phosphoenolpyruvate carboxylase; Forms oxaloacetate, a four-carbon dicarboxylic acid source for the tricarboxylic acid cycle; Belongs to the PEPCase type 1 family. | 0.819 |
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