STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000402815_00923Unannotated protein. (204 aa)    
Predicted Functional Partners:
GCA_000402815_00922
Unannotated protein.
 
 0.998
GCA_000402815_00047
Unannotated protein.
   
 0.939
GCA_000402815_00621
Unannotated protein.
   
 0.923
GCA_000402815_00930
Unannotated protein.
    
 0.868
GCA_000402815_00924
Unannotated protein.
  
  
 0.818
GCA_000402815_00929
Unannotated protein.
   
   0.782
GCA_000402815_00921
Unannotated protein.
       0.780
GCA_000402815_00925
Unannotated protein.
       0.780
GCA_000402815_00926
Unannotated protein.
       0.780
GCA_000402815_00927
Unannotated protein.
       0.773
Your Current Organism:
Marinimicrobia bacterium SCGC AAA160I06
NCBI taxonomy Id: 1007123
Other names: M. bacterium SCGC AAA160-I06, Marinimicrobia bacterium SCGC AAA160-I06, SAR406 cluster bacterium SCGC AAA160-I06
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.