STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BN1708_013417Beta-lactamase domain-containing protein. (413 aa)    
Predicted Functional Partners:
BN1708_004294
Uncharacterized protein.
     
 0.662
BN1708_001900
Uncharacterized protein.
    
 0.649
BN1708_009689
Uncharacterized protein.
    
 0.649
BN1708_002640
Uncharacterized protein.
    
 0.649
COQ3
Ubiquinone biosynthesis O-methyltransferase, mitochondrial; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the class I-like SAM-binding methyltransferase superfamily. UbiG/COQ3 family.
    
 0.649
BN1708_004911
Methyltranfer_dom domain-containing protein.
    
 0.649
BN1708_005875
Uncharacterized protein.
    
 0.649
BN1708_019498
Methyltransf_11 domain-containing protein.
    
 0.649
BN1708_008687
Methyltransf_25 domain-containing protein.
    
 0.649
BN1708_009445
Complex1_30kDa domain-containing protein; Belongs to the complex I 30 kDa subunit family.
    
 0.605
Your Current Organism:
Verticillium longisporum
NCBI taxonomy Id: 100787
Other names: CBS 124.64, CBS H-19247, MUCL 9802, NRRL 54793, PD687, V. longisporum, Verticillium dahliae var. longisporum, Verticillium longisporum (C. Stark) Karapapa et al.
Server load: low (30%) [HD]