STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_205852Ornithine decarboxylase; Belongs to the Orn/Lys/Arg decarboxylase class-II family. (466 aa)    
Predicted Functional Partners:
MMYC01_205219
Ornithine decarboxylase antizyme.
    
 0.997
MMYC01_202371
Argininosuccinate synthase.
  
 
 0.923
MMYC01_209335
Spermidine synthase; Belongs to the spermidine/spermine synthase family.
  
 0.921
MMYC01_206762
Delta(1)-pyrroline-2-carboxylate reductase.
  
 
 0.919
MMYC01_207305
Putative aspartate-semialdehyde dehydrogenase.
  
 
 0.918
MMYC01_201298
Putative agmatinase 1; Belongs to the arginase family.
  
 
 0.912
MMYC01_202756
Homoserine dehydrogenase.
  
 
 0.910
MMYC01_204757
Aspartokinase.
   
 0.909
MMYC01_204308
Ornithine aminotransferase.
    
 0.904
MMYC01_209557
Arginase; Belongs to the arginase family.
  
 
 0.898
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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