STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203324Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family. (276 aa)    
Predicted Functional Partners:
MMYC01_200011
Vacuolar protein-sorting-associated protein 25.
   
 0.999
MMYC01_204933
Vacuolar protein-sorting-associated protein 36.
   
 0.999
MMYC01_205406
Charged multivesicular body protein 6.
    
 0.983
MMYC01_206893
Vacuolar-sorting protein SNF7.
    
 0.949
MMYC01_200257
Vacuolar protein sorting-associated protein 28; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process.
   
 0.928
MMYC01_205074
Protein ELC.
    
 0.872
MMYC01_208190
Uncharacterized protein.
 
 
   0.832
MMYC01_205709
Vacuolar protein-sorting-associated protein 24.
    
 0.822
MMYC01_204620
Vacuolar protein sorting-associated protein 24.
    
 0.822
MMYC01_200059
Vacuolar protein sorting-associated protein 27; Component of the ESCRT-0 complex which is the sorting receptor for ubiquitinated cargo proteins at the multivesicular body (MVB) and recruits ESCRT-I to the MVB outer membrane.
     
 0.806
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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