STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MMYC01_203417AAA domain-containing protein. (987 aa)    
Predicted Functional Partners:
MMYC01_200507
Nuclear protein localization protein 4.
   
 0.806
MMYC01_201373
Ubiquitin fusion degradation protein 1.
    
 0.804
MMYC01_208294
UBX domain-containing protein 5.
    
 0.796
MMYC01_209071
Protein OS-9.
    
 0.791
MMYC01_208612
Ubiquitin thioesterase OTU1.
   
 0.788
MMYC01_208830
UBX domain-containing protein 1.
   
 0.780
MMYC01_201114
UBX domain-containing protein 1.
    
 0.761
MMYC01_206607
Proteasome subunit beta.
   
  0.743
MMYC01_206393
UBX domain-containing protein 10.
    
 0.732
MMYC01_205928
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
 0.718
Your Current Organism:
Madurella mycetomatis
NCBI taxonomy Id: 100816
Other names: M. mycetomatis, Madurella ikedae, Madurella mycetomi, Streptotrix mycetomatis
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