STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TASI_0108VgrG protein. (517 aa)    
Predicted Functional Partners:
TASI_0087
Outer membrane protein ImpK/VasF; OmpA/MotB domain.
 
  
 0.930
TASI_1042
VgrG protein.
  
  
 
0.909
TASI_1040
VgrG protein.
  
  
 
0.907
TASI_0112
Hypothetical protein.
 
    0.890
TASI_0092
Uncharacterized protein ImpB.
 
  
 0.884
TASI_0094
Uncharacterized protein ImpD.
 
  
 0.877
TASI_0081
Uncharacterized protein ImpH/VasB.
 
  
 0.873
TASI_0091
Uncharacterized protein ImpA.
 
  
 0.871
TASI_0093
Uncharacterized protein ImpC.
 
  
 0.829
TASI_0096
Uncharacterized protein ImpF.
 
  
 0.818
Your Current Organism:
Taylorella asinigenitalis
NCBI taxonomy Id: 1008459
Other names: T. asinigenitalis MCE3, Taylorella asinigenitalis MCE3, Taylorella asinigenitalis str. MCE3, Taylorella asinigenitalis strain MCE3
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.