Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
C9orf72 | Lmln | ENSMUSP00000103762 | ENSMUSP00000023497 | Guanine nucleotide exchange C9orf72 homolog; Component of the C9orf72-SMCR8 complex, a complex that has guanine nucleotide exchange factor (GEF) activity and regulates autophagy. In the complex, C9orf72 and SMCR8 probably constitute the catalytic subunits that promote the exchange of GDP to GTP, converting inactive GDP-bound RAB8A and RAB39B into their active GTP-bound form, thereby promoting autophagosome maturation (By similarity). The C9orf72-SMCR8 complex also acts as a regulator of autophagy initiation by interacting with the ATG1/ULK1 kinase complex and modulating its protein kin [...] | Leishmanolysin-like peptidase; Metalloprotease. | 0.631 |
Ctla2b | Lmln | ENSMUSP00000021884 | ENSMUSP00000023497 | Protein CTLA-2-beta; Not known, expressed in activated T-cell. | Leishmanolysin-like peptidase; Metalloprotease. | 0.461 |
Fam50a | Lmln | ENSMUSP00000109797 | ENSMUSP00000023497 | Protein FAM50A; May be a DNA-binding protein or transcriptional factor. | Leishmanolysin-like peptidase; Metalloprotease. | 0.459 |
Gpr65 | Lmln | ENSMUSP00000074581 | ENSMUSP00000023497 | Psychosine receptor; Receptor for the glycosphingolipid psychosine (PSY) and several related glycosphingolipids (By similarity). Plays a role in immune response by maintaining lysosome function and supporting phagocytosis-mediated intracellular bacteria clearance. May have a role in activation-induced cell death or differentiation of T-cells. | Leishmanolysin-like peptidase; Metalloprotease. | 0.427 |
Lmln | C9orf72 | ENSMUSP00000023497 | ENSMUSP00000103762 | Leishmanolysin-like peptidase; Metalloprotease. | Guanine nucleotide exchange C9orf72 homolog; Component of the C9orf72-SMCR8 complex, a complex that has guanine nucleotide exchange factor (GEF) activity and regulates autophagy. In the complex, C9orf72 and SMCR8 probably constitute the catalytic subunits that promote the exchange of GDP to GTP, converting inactive GDP-bound RAB8A and RAB39B into their active GTP-bound form, thereby promoting autophagosome maturation (By similarity). The C9orf72-SMCR8 complex also acts as a regulator of autophagy initiation by interacting with the ATG1/ULK1 kinase complex and modulating its protein kin [...] | 0.631 |
Lmln | Ctla2b | ENSMUSP00000023497 | ENSMUSP00000021884 | Leishmanolysin-like peptidase; Metalloprotease. | Protein CTLA-2-beta; Not known, expressed in activated T-cell. | 0.461 |
Lmln | Fam50a | ENSMUSP00000023497 | ENSMUSP00000109797 | Leishmanolysin-like peptidase; Metalloprotease. | Protein FAM50A; May be a DNA-binding protein or transcriptional factor. | 0.459 |
Lmln | Gpr65 | ENSMUSP00000023497 | ENSMUSP00000074581 | Leishmanolysin-like peptidase; Metalloprotease. | Psychosine receptor; Receptor for the glycosphingolipid psychosine (PSY) and several related glycosphingolipids (By similarity). Plays a role in immune response by maintaining lysosome function and supporting phagocytosis-mediated intracellular bacteria clearance. May have a role in activation-induced cell death or differentiation of T-cells. | 0.427 |
Lmln | Pacc1 | ENSMUSP00000023497 | ENSMUSP00000027940 | Leishmanolysin-like peptidase; Metalloprotease. | Proton-activated chloride channel; Proton-activated chloride channel that mediates import of chloride ion in response to extracellular acidic pH. Involved in acidosis-induced cell death by mediating chloride influx and subsequent cell swelling. | 0.430 |
Lmln | Slitrk4 | ENSMUSP00000023497 | ENSMUSP00000064443 | Leishmanolysin-like peptidase; Metalloprotease. | SLIT and NTRK-like protein 4; It is involved in synaptogenesis and promotes synapse differentiation (By similarity). Suppresses neurite outgrowth. | 0.418 |
Pacc1 | Lmln | ENSMUSP00000027940 | ENSMUSP00000023497 | Proton-activated chloride channel; Proton-activated chloride channel that mediates import of chloride ion in response to extracellular acidic pH. Involved in acidosis-induced cell death by mediating chloride influx and subsequent cell swelling. | Leishmanolysin-like peptidase; Metalloprotease. | 0.430 |
Slitrk4 | Lmln | ENSMUSP00000064443 | ENSMUSP00000023497 | SLIT and NTRK-like protein 4; It is involved in synaptogenesis and promotes synapse differentiation (By similarity). Suppresses neurite outgrowth. | Leishmanolysin-like peptidase; Metalloprotease. | 0.418 |