Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ctsg | Serpinb3d | ENSMUSP00000015583 | ENSMUSP00000023861 | Cathepsin G; This vimentin-specific protease may regulate the reorganization of vimentin filaments, occurring during cell differentiation, movement and mitosis. | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | 0.919 |
Lce1m | Serpinb3d | ENSMUSP00000029520 | ENSMUSP00000023861 | Late cornified envelope 1M. | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | 0.478 |
Lce1m | Sprr2k | ENSMUSP00000029520 | ENSMUSP00000063287 | Late cornified envelope 1M. | Small proline-rich protein 2K; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity). | 0.489 |
Serpinb3d | Ctsg | ENSMUSP00000023861 | ENSMUSP00000015583 | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | Cathepsin G; This vimentin-specific protease may regulate the reorganization of vimentin filaments, occurring during cell differentiation, movement and mitosis. | 0.919 |
Serpinb3d | Lce1m | ENSMUSP00000023861 | ENSMUSP00000029520 | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | Late cornified envelope 1M. | 0.478 |
Serpinb3d | Sprr2k | ENSMUSP00000023861 | ENSMUSP00000063287 | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | Small proline-rich protein 2K; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity). | 0.402 |
Sprr2k | Lce1m | ENSMUSP00000063287 | ENSMUSP00000029520 | Small proline-rich protein 2K; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity). | Late cornified envelope 1M. | 0.489 |
Sprr2k | Serpinb3d | ENSMUSP00000063287 | ENSMUSP00000023861 | Small proline-rich protein 2K; Cross-linked envelope protein of keratinocytes. It is a keratinocyte protein that first appears in the cell cytosol, but ultimately becomes cross-linked to membrane proteins by transglutaminase. All that results in the formation of an insoluble envelope beneath the plasma membrane (By similarity). | Serine (Or cysteine) peptidase inhibitor, clade B (Ovalbumin), member 3D; Belongs to the serpin family. | 0.402 |