STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Yipf4Protein YIPF4; Involved in the maintenance of the Golgi structure. Belongs to the YIP1 family. (246 aa)    
Predicted Functional Partners:
Yipf3
Protein YIPF3, N-terminally processed; Involved in the maintenance of the Golgi structure. May play a role in hematopoiesis (By similarity); Belongs to the YIP1 family.
   
 
 0.899
Yipf2
Protein YIPF2; Belongs to the YIP1 family.
   
 
 0.870
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
 
 0.869
Yif1a
Protein YIF1A; Possible role in transport between endoplasmic reticulum and Golgi.
   
 
 0.822
Yif1b
Protein YIF1B; Belongs to the YIF1 family.
   
 
 0.768
Tmem41a
Transmembrane protein 41A; Belongs to the TMEM41 family.
      
 0.596
Unc50
Protein unc-50 homolog; May be involved in cell surface expression of neuronal nicotinic receptors. Binds RNA (By similarity).
   
  
 0.587
Tmppe
Transmembrane protein with metallophosphoesterase domain.
      
 0.577
Akirin1
Akirin-1; Functions as signal transducer for MSTN during skeletal muscle regeneration and myogenesis. May regulate chemotaxis of both macrophages and myoblasts by reorganising actin cytoskeleton, leading to more efficient lamellipodia formation via a PI3 kinase dependent pathway. Belongs to the akirin family.
   
  
 0.524
Pqlc3
Solute carrier family 66 member 3.
      
 0.488
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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