STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Tmem168Transmembrane protein 168. (697 aa)    
Predicted Functional Partners:
Zmynd19
Zinc finger MYND domain-containing protein 19; May be involved as a regulatory molecule in GPR24/MCH-R1 signaling.
      
 0.573
Yipf1
Protein YIPF1; Belongs to the YIP1 family.
   
  
 0.569
Ndc1
Nucleoporin NDC1; Component of the nuclear pore complex (NPC), which plays a key role in de novo assembly and insertion of NPC in the nuclear envelope. Required for NPC and nuclear envelope assembly, possibly by forming a link between the nuclear envelope membrane and soluble nucleoporins, thereby anchoring the NPC in the membrane (By similarity); Belongs to the NDC1 family.
   
  
 0.547
Rsrc2
Arginine/serine-rich coiled-coil protein 2; Belongs to the RSRC2 family.
   
  
 0.546
Ccdc70
Coiled-coil domain-containing protein 70.
      
 0.539
Tmem140
Transmembrane protein 140.
   
  
 0.526
Zfp65
Zinc finger protein 65.
   
  
 0.509
Ccdc28a
Coiled-coil domain-containing 28A.
      
 0.506
Tbc1d31
TBC1 domain family member 31.
   
  
 0.487
Ttc14
Tetratricopeptide repeat protein 14.
   
  
 0.479
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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