Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| 1810030O07Rik | Eif2s3x | ENSMUSP00000059095 | ENSMUSP00000059395 | Uncharacterized protein CXorf38 homolog. | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | 0.602 |
| 1810030O07Rik | Gm45208 | ENSMUSP00000059095 | ENSMUSP00000147061 | Uncharacterized protein CXorf38 homolog. | PRA1 family protein. | 0.674 |
| 1810030O07Rik | Pbdc1 | ENSMUSP00000059095 | ENSMUSP00000033577 | Uncharacterized protein CXorf38 homolog. | Protein PBDC1. | 0.666 |
| 1810030O07Rik | Shroom4 | ENSMUSP00000059095 | ENSMUSP00000100070 | Uncharacterized protein CXorf38 homolog. | Protein Shroom4; Probable regulator of cytoskeletal architecture that plays an important role in development. May regulate cellular and cytoskeletal architecture by modulating the spatial distribution of myosin II. Belongs to the shroom family. | 0.703 |
| Eif2s3x | 1810030O07Rik | ENSMUSP00000059395 | ENSMUSP00000059095 | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | Uncharacterized protein CXorf38 homolog. | 0.602 |
| Eif2s3x | Gm45208 | ENSMUSP00000059395 | ENSMUSP00000147061 | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | PRA1 family protein. | 0.436 |
| Eif2s3x | Pbdc1 | ENSMUSP00000059395 | ENSMUSP00000033577 | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | Protein PBDC1. | 0.731 |
| Eif2s3x | Shroom4 | ENSMUSP00000059395 | ENSMUSP00000100070 | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | Protein Shroom4; Probable regulator of cytoskeletal architecture that plays an important role in development. May regulate cellular and cytoskeletal architecture by modulating the spatial distribution of myosin II. Belongs to the shroom family. | 0.614 |
| Gm45208 | 1810030O07Rik | ENSMUSP00000147061 | ENSMUSP00000059095 | PRA1 family protein. | Uncharacterized protein CXorf38 homolog. | 0.674 |
| Gm45208 | Eif2s3x | ENSMUSP00000147061 | ENSMUSP00000059395 | PRA1 family protein. | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | 0.436 |
| Gm45208 | Pbdc1 | ENSMUSP00000147061 | ENSMUSP00000033577 | PRA1 family protein. | Protein PBDC1. | 0.573 |
| Gm45208 | Shroom4 | ENSMUSP00000147061 | ENSMUSP00000100070 | PRA1 family protein. | Protein Shroom4; Probable regulator of cytoskeletal architecture that plays an important role in development. May regulate cellular and cytoskeletal architecture by modulating the spatial distribution of myosin II. Belongs to the shroom family. | 0.513 |
| Mysm1 | Pbdc1 | ENSMUSP00000075269 | ENSMUSP00000033577 | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation. Required for correct regulation of hematopoiesis [...] | Protein PBDC1. | 0.641 |
| Olfr1408 | Pbdc1 | ENSMUSP00000143864 | ENSMUSP00000033577 | Olfactory receptor. | Protein PBDC1. | 0.575 |
| Pbdc1 | 1810030O07Rik | ENSMUSP00000033577 | ENSMUSP00000059095 | Protein PBDC1. | Uncharacterized protein CXorf38 homolog. | 0.666 |
| Pbdc1 | Eif2s3x | ENSMUSP00000033577 | ENSMUSP00000059395 | Protein PBDC1. | Eukaryotic translation initiation factor 2 subunit 3, X-linked; As a subunit of eukaryotic initiation factor 2 (eIF2), involved in the early steps of protein synthesis. In the presence of GTP, eIF2 forms a ternary complex with initiator tRNA Met-tRNAi and then recruits the 40S ribosomal complex, a step that determines the rate of protein translation. This step is followed by mRNA binding to form the 43S pre-initiation complex. Junction of the 60S ribosomal subunit to form the 80S initiation complex is preceded by hydrolysis of the GTP bound to eIF2 and release of an eIF2-GDP binary com [...] | 0.731 |
| Pbdc1 | Gm45208 | ENSMUSP00000033577 | ENSMUSP00000147061 | Protein PBDC1. | PRA1 family protein. | 0.573 |
| Pbdc1 | Mysm1 | ENSMUSP00000033577 | ENSMUSP00000075269 | Protein PBDC1. | Histone H2A deubiquitinase MYSM1; Metalloprotease that specifically deubiquitinates monoubiquitinated histone H2A, a specific tag for epigenetic transcriptional repression, thereby acting as a coactivator. Preferentially deubiquitinates monoubiquitinated H2A in hyperacetylated nucleosomes. Deubiquitination of histone H2A leads to facilitate the phosphorylation and dissociation of histone H1 from the nucleosome. Acts as a coactivator by participating in the initiation and elongation steps of androgen receptor (AR)-induced gene activation. Required for correct regulation of hematopoiesis [...] | 0.641 |
| Pbdc1 | Olfr1408 | ENSMUSP00000033577 | ENSMUSP00000143864 | Protein PBDC1. | Olfactory receptor. | 0.575 |
| Pbdc1 | Pdcd5 | ENSMUSP00000033577 | ENSMUSP00000113761 | Protein PBDC1. | Programmed cell death protein 5; May function in the process of apoptosis; Belongs to the PDCD5 family. | 0.569 |
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