STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Trim42Tripartite motif-containing protein 42; Belongs to the TRIM/RBCC family. (723 aa)    
Predicted Functional Partners:
Gm14781
Predicted gene 14781.
   
 
 0.689
1700093K21Rik
Uncharacterized protein C2orf74 homolog.
   
  
 0.655
1700001J03Rik
RIKEN cDNA 1700001J03 gene.
   
  
 0.648
Trim69
E3 ubiquitin-protein ligase TRIM69; May have E3 ubiquitin-protein ligase activity. May play a role in apoptosis; Belongs to the TRIM/RBCC family.
   
  
 0.643
Mageb5
Melanoma antigen, family B, 5.
   
 
 0.613
Tgif2lx2
TGFB-induced factor homeobox 2-like, X-linked 1.
   
 
 0.581
Tgif2lx1
TGFB-induced factor homeobox 2-like, X-linked 1.
   
 
 0.581
Saxo1
Stabilizer of axonemal microtubules 1.
   
 
 0.578
Lypd4
Ly6/PLAUR domain-containing protein 4.
   
  
 0.559
Olfr961
Olfactory receptor MOR224-5.
   
  
 0.553
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
Server load: medium (76%) [HD]