Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Lrrc28 | Tsga8 | ENSMUSP00000052177 | ENSMUSP00000043015 | Leucine-rich repeat-containing protein 28. | Testis-specific gene A8 protein. | 0.523 |
Ribc1 | Tsga8 | ENSMUSP00000026288 | ENSMUSP00000043015 | RIB43A-like with coiled-coils protein 1; Belongs to the RIB43A family. | Testis-specific gene A8 protein. | 0.579 |
Smcp | Spert | ENSMUSP00000096487 | ENSMUSP00000127439 | Sperm mitochondrial-associated cysteine-rich protein; Involved in sperm motility. Its absence is associated with genetic background dependent male infertility. Infertility may be due to reduced sperm motility in the female reproductive tract and inability to penetrate the oocyte zona pellucida. | Protein chibby homolog 2; Belongs to the chibby family. SPERT subfamily. | 0.452 |
Smcp | Tsga8 | ENSMUSP00000096487 | ENSMUSP00000043015 | Sperm mitochondrial-associated cysteine-rich protein; Involved in sperm motility. Its absence is associated with genetic background dependent male infertility. Infertility may be due to reduced sperm motility in the female reproductive tract and inability to penetrate the oocyte zona pellucida. | Testis-specific gene A8 protein. | 0.497 |
Spert | Smcp | ENSMUSP00000127439 | ENSMUSP00000096487 | Protein chibby homolog 2; Belongs to the chibby family. SPERT subfamily. | Sperm mitochondrial-associated cysteine-rich protein; Involved in sperm motility. Its absence is associated with genetic background dependent male infertility. Infertility may be due to reduced sperm motility in the female reproductive tract and inability to penetrate the oocyte zona pellucida. | 0.452 |
Spert | Tsga8 | ENSMUSP00000127439 | ENSMUSP00000043015 | Protein chibby homolog 2; Belongs to the chibby family. SPERT subfamily. | Testis-specific gene A8 protein. | 0.583 |
Spz1 | Tsga8 | ENSMUSP00000054083 | ENSMUSP00000043015 | Spermatogenic leucine zipper protein 1; Transcription factor that binds to the DNA sequence 5'- CANNTG-3'(E box) and the G-box motif. Directly binds to a guanine-rich region of the PCNA promoter and up-regulates its expression which in turn induces cell transformation and tumor formation. May play an important role in the regulation of cell proliferation and differentiation during spermatogenesis. | Testis-specific gene A8 protein. | 0.461 |
Tnp1 | Tsga8 | ENSMUSP00000027374 | ENSMUSP00000043015 | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. The histone H2AB1-H2BC1/TH2B dimer is required for loading of TNP1 onto chromatin. | Testis-specific gene A8 protein. | 0.401 |
Tsga8 | Lrrc28 | ENSMUSP00000043015 | ENSMUSP00000052177 | Testis-specific gene A8 protein. | Leucine-rich repeat-containing protein 28. | 0.523 |
Tsga8 | Ribc1 | ENSMUSP00000043015 | ENSMUSP00000026288 | Testis-specific gene A8 protein. | RIB43A-like with coiled-coils protein 1; Belongs to the RIB43A family. | 0.579 |
Tsga8 | Smcp | ENSMUSP00000043015 | ENSMUSP00000096487 | Testis-specific gene A8 protein. | Sperm mitochondrial-associated cysteine-rich protein; Involved in sperm motility. Its absence is associated with genetic background dependent male infertility. Infertility may be due to reduced sperm motility in the female reproductive tract and inability to penetrate the oocyte zona pellucida. | 0.497 |
Tsga8 | Spert | ENSMUSP00000043015 | ENSMUSP00000127439 | Testis-specific gene A8 protein. | Protein chibby homolog 2; Belongs to the chibby family. SPERT subfamily. | 0.583 |
Tsga8 | Spz1 | ENSMUSP00000043015 | ENSMUSP00000054083 | Testis-specific gene A8 protein. | Spermatogenic leucine zipper protein 1; Transcription factor that binds to the DNA sequence 5'- CANNTG-3'(E box) and the G-box motif. Directly binds to a guanine-rich region of the PCNA promoter and up-regulates its expression which in turn induces cell transformation and tumor formation. May play an important role in the regulation of cell proliferation and differentiation during spermatogenesis. | 0.461 |
Tsga8 | Tnp1 | ENSMUSP00000043015 | ENSMUSP00000027374 | Testis-specific gene A8 protein. | Spermatid nuclear transition protein 1; Plays a key role in the replacement of histones to protamine in the elongating spermatids of mammals. In condensing spermatids, loaded onto the nucleosomes, where it promotes the recruitment and processing of protamines, which are responsible for histone eviction. The histone H2AB1-H2BC1/TH2B dimer is required for loading of TNP1 onto chromatin. | 0.401 |