Lce3c protein (mouse) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Lce3c

Late cornified envelope 3C. (98 aa)

Predicted Functional Partners:

Lce3b

0.818

Lce3d

0.814

Lce3e

0.813

Lce3f

0.797

Lce1b

0.767

Lce1d

0.742

Sprr2j-ps

0.720

Lce3a

0.711

Cnfn

0.706

Sprr3

0.699

Your Current Organism:

Mus musculus

NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice

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structured XML interaction data, according to the 'PSI-MI' data standard

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... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
Cnfn	Lce1b	ENSMUSP00000130957	ENSMUSP00000029531	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Late cornified envelope 1B.	0.623
Cnfn	Lce3a	ENSMUSP00000130957	ENSMUSP00000066468	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Late cornified envelope 3A.	0.507
Cnfn	Lce3b	ENSMUSP00000130957	ENSMUSP00000046325	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Late cornified envelope 3B.	0.601
Cnfn	Lce3c	ENSMUSP00000130957	ENSMUSP00000050666	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Late cornified envelope 3C.	0.706
Cnfn	Lce3f	ENSMUSP00000130957	ENSMUSP00000088375	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Late cornified envelope 3F.	0.506
Cnfn	Sprr3	ENSMUSP00000130957	ENSMUSP00000056287	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	Small proline-rich protein 3; Cross-linked envelope protein of keratinocytes; Belongs to the cornifin (SPRR) family.	0.767
Lce1b	Cnfn	ENSMUSP00000029531	ENSMUSP00000130957	Late cornified envelope 1B.	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	0.623
Lce1b	Lce1d	ENSMUSP00000029531	ENSMUSP00000029524	Late cornified envelope 1B.	Late cornified envelope 1D.	0.908
Lce1b	Lce3b	ENSMUSP00000029531	ENSMUSP00000046325	Late cornified envelope 1B.	Late cornified envelope 3B.	0.774
Lce1b	Lce3c	ENSMUSP00000029531	ENSMUSP00000050666	Late cornified envelope 1B.	Late cornified envelope 3C.	0.767
Lce1b	Sprr3	ENSMUSP00000029531	ENSMUSP00000056287	Late cornified envelope 1B.	Small proline-rich protein 3; Cross-linked envelope protein of keratinocytes; Belongs to the cornifin (SPRR) family.	0.561
Lce1d	Lce1b	ENSMUSP00000029524	ENSMUSP00000029531	Late cornified envelope 1D.	Late cornified envelope 1B.	0.908
Lce1d	Lce3b	ENSMUSP00000029524	ENSMUSP00000046325	Late cornified envelope 1D.	Late cornified envelope 3B.	0.780
Lce1d	Lce3c	ENSMUSP00000029524	ENSMUSP00000050666	Late cornified envelope 1D.	Late cornified envelope 3C.	0.742
Lce1d	Lce3d	ENSMUSP00000029524	ENSMUSP00000130993	Late cornified envelope 1D.	Late cornified envelope 3D.	0.410
Lce1d	Lce3e	ENSMUSP00000029524	ENSMUSP00000096484	Late cornified envelope 1D.	Late cornified envelope 3E.	0.457
Lce1d	Sprr3	ENSMUSP00000029524	ENSMUSP00000056287	Late cornified envelope 1D.	Small proline-rich protein 3; Cross-linked envelope protein of keratinocytes; Belongs to the cornifin (SPRR) family.	0.665
Lce3a	Cnfn	ENSMUSP00000066468	ENSMUSP00000130957	Late cornified envelope 3A.	Cornifelin; Part of the insoluble cornified cell envelope (CE) of stratified squamous epithelia.	0.507
Lce3a	Lce3b	ENSMUSP00000066468	ENSMUSP00000046325	Late cornified envelope 3A.	Late cornified envelope 3B.	0.870
Lce3a	Lce3c	ENSMUSP00000066468	ENSMUSP00000050666	Late cornified envelope 3A.	Late cornified envelope 3C.	0.711