Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fam102b | Tcta | ENSMUSP00000131904 | ENSMUSP00000045063 | Protein FAM102B; Belongs to the FAM102 family. | T-cell leukemia translocation-altered gene protein homolog; May be required for cellular fusion during osteoclastogenesis; Belongs to the TCTA family. | 0.477 |
Fam102b | Zfp235 | ENSMUSP00000131904 | ENSMUSP00000050803 | Protein FAM102B; Belongs to the FAM102 family. | Zinc finger protein 235. | 0.506 |
Fpgt | Zfp235 | ENSMUSP00000068939 | ENSMUSP00000050803 | Fucose-1-phosphate guanylyltransferase; Catalyzes the formation of GDP-L-fucose from GTP and L- fucose-1-phosphate. Functions as a salvage pathway to reutilize L-fucose arising from the turnover of glycoproteins and glycolipids (Probable). | Zinc finger protein 235. | 0.431 |
Fpgt | Zswim3 | ENSMUSP00000068939 | ENSMUSP00000050970 | Fucose-1-phosphate guanylyltransferase; Catalyzes the formation of GDP-L-fucose from GTP and L- fucose-1-phosphate. Functions as a salvage pathway to reutilize L-fucose arising from the turnover of glycoproteins and glycolipids (Probable). | Zinc finger SWIM domain-containing protein 3. | 0.427 |
Lrrc57 | Zfp235 | ENSMUSP00000099555 | ENSMUSP00000050803 | Leucine-rich repeat-containing protein 57. | Zinc finger protein 235. | 0.532 |
Taf1a | Zfp235 | ENSMUSP00000094808 | ENSMUSP00000050803 | TATA box-binding protein-associated factor RNA polymerase I subunit A; Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits (By similarity). | Zinc finger protein 235. | 0.431 |
Taf1a | Zswim3 | ENSMUSP00000094808 | ENSMUSP00000050970 | TATA box-binding protein-associated factor RNA polymerase I subunit A; Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits (By similarity). | Zinc finger SWIM domain-containing protein 3. | 0.416 |
Tcta | Fam102b | ENSMUSP00000045063 | ENSMUSP00000131904 | T-cell leukemia translocation-altered gene protein homolog; May be required for cellular fusion during osteoclastogenesis; Belongs to the TCTA family. | Protein FAM102B; Belongs to the FAM102 family. | 0.477 |
Tcta | Zfp235 | ENSMUSP00000045063 | ENSMUSP00000050803 | T-cell leukemia translocation-altered gene protein homolog; May be required for cellular fusion during osteoclastogenesis; Belongs to the TCTA family. | Zinc finger protein 235. | 0.462 |
Trim28 | Zfp235 | ENSMUSP00000005705 | ENSMUSP00000050803 | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | Zinc finger protein 235. | 0.526 |
Vmn1r233 | Zfp235 | ENSMUSP00000158452 | ENSMUSP00000050803 | Vomeronasal type-1 receptor. | Zinc finger protein 235. | 0.479 |
Vmn1r233 | Zswim3 | ENSMUSP00000158452 | ENSMUSP00000050970 | Vomeronasal type-1 receptor. | Zinc finger SWIM domain-containing protein 3. | 0.451 |
Zfp235 | Fam102b | ENSMUSP00000050803 | ENSMUSP00000131904 | Zinc finger protein 235. | Protein FAM102B; Belongs to the FAM102 family. | 0.506 |
Zfp235 | Fpgt | ENSMUSP00000050803 | ENSMUSP00000068939 | Zinc finger protein 235. | Fucose-1-phosphate guanylyltransferase; Catalyzes the formation of GDP-L-fucose from GTP and L- fucose-1-phosphate. Functions as a salvage pathway to reutilize L-fucose arising from the turnover of glycoproteins and glycolipids (Probable). | 0.431 |
Zfp235 | Lrrc57 | ENSMUSP00000050803 | ENSMUSP00000099555 | Zinc finger protein 235. | Leucine-rich repeat-containing protein 57. | 0.532 |
Zfp235 | Taf1a | ENSMUSP00000050803 | ENSMUSP00000094808 | Zinc finger protein 235. | TATA box-binding protein-associated factor RNA polymerase I subunit A; Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (pre-initiation complex) during RNA polymerase I-dependent transcription. The rate of PIC formation probably is primarily dependent on the rate of association of SL1/TIF-IB with the rDNA promoter. SL1/TIF-IB is involved in stabilization of nucleolar transcription factor 1/UBTF on rDNA. Formation of SL1/TIF-IB excludes the association of TBP with TFIID subunits (By similarity). | 0.431 |
Zfp235 | Tcta | ENSMUSP00000050803 | ENSMUSP00000045063 | Zinc finger protein 235. | T-cell leukemia translocation-altered gene protein homolog; May be required for cellular fusion during osteoclastogenesis; Belongs to the TCTA family. | 0.462 |
Zfp235 | Trim28 | ENSMUSP00000050803 | ENSMUSP00000005705 | Zinc finger protein 235. | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | 0.526 |
Zfp235 | Vmn1r233 | ENSMUSP00000050803 | ENSMUSP00000158452 | Zinc finger protein 235. | Vomeronasal type-1 receptor. | 0.479 |
Zfp235 | Zswim3 | ENSMUSP00000050803 | ENSMUSP00000050970 | Zinc finger protein 235. | Zinc finger SWIM domain-containing protein 3. | 0.475 |
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