STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp367Zinc finger protein 367; Transcriptional activator. Isoform 1 may be involved in transcriptional activation of erythroid genes (By similarity). (340 aa)    
Predicted Functional Partners:
Ap5s1
AP-5 complex subunit sigma-1; As part of AP-5, a probable fifth adaptor protein complex it may be involved in endosomal transport.
      
 0.641
Nemp1
Nuclear envelope integral membrane protein 1.
   
  
 0.586
Ccdc150
Coiled-coil domain-containing protein 150.
      
 0.582
Sgf29
SAGA-associated factor 29; Chromatin reader component of some histone acetyltransferase (HAT) SAGA-type complexes like the TFTC-HAT, ATAC or STAGA complexes. SGF29 specifically recognizes and binds methylated 'Lys-4' of histone H3 (H3K4me), with a preference for trimethylated form (H3K4me3). In the SAGA-type complexes, SGF29 is required to recruit complexes to H3K4me. Involved in the response to endoplasmic reticulum (ER) stress by recruiting the SAGA complex to H3K4me, thereby promoting histone H3 acetylation and cell survival.
   
 
 0.565
Ccdc77
Coiled-coil domain-containing protein 77.
   
  
 0.543
Depdc1b
DEP domain-containing protein 1B.
   
  
 0.523
Zbtb3
Zinc finger and BTB domain-containing protein 3; May be involved in transcriptional regulation.
      
 0.520
Ccdc34
Coiled-coil domain-containing protein 34.
   
 
 0.515
Ribc2
RIB43A-like with coiled-coils protein 2; Belongs to the RIB43A family.
    
 
 0.513
Gstcd
Glutathione S-transferase C-terminal domain-containing protein; Belongs to the GSTCD family.
   
 
 0.513
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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