Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1500011B03Rik | Cldn34b2 | ENSMUSP00000098411 | ENSMUSP00000075967 | RIKEN cDNA 1500011B03 gene. | Claudin 34B2. | 0.707 |
1500011B03Rik | Pramef20 | ENSMUSP00000098411 | ENSMUSP00000112488 | RIKEN cDNA 1500011B03 gene. | PRAME family member 20. | 0.645 |
1500011B03Rik | Tmem136 | ENSMUSP00000098411 | ENSMUSP00000051435 | RIKEN cDNA 1500011B03 gene. | TLC domain-containing protein 5. | 0.511 |
Agpat1 | Pomp | ENSMUSP00000048573 | ENSMUSP00000031654 | 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha; Converts 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid or LPA) into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone. | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | 0.414 |
Agpat1 | Tmem136 | ENSMUSP00000048573 | ENSMUSP00000051435 | 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha; Converts 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid or LPA) into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone. | TLC domain-containing protein 5. | 0.549 |
Arhgef12 | Tmem136 | ENSMUSP00000126598 | ENSMUSP00000051435 | Rho guanine nucleotide exchange factor 12; May play a role in the regulation of RhoA GTPase by guanine nucleotide-binding alpha-12 (GNA12) and alpha-13 (GNA13). Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPase and may act as GTPase-activating protein (GAP) for GNA12 and GNA13 (By similarity). | TLC domain-containing protein 5. | 0.468 |
Cldn34b2 | 1500011B03Rik | ENSMUSP00000075967 | ENSMUSP00000098411 | Claudin 34B2. | RIKEN cDNA 1500011B03 gene. | 0.707 |
Cldn34b2 | Pramef20 | ENSMUSP00000075967 | ENSMUSP00000112488 | Claudin 34B2. | PRAME family member 20. | 0.696 |
Cldn34b2 | Tmem136 | ENSMUSP00000075967 | ENSMUSP00000051435 | Claudin 34B2. | TLC domain-containing protein 5. | 0.607 |
Pomp | Agpat1 | ENSMUSP00000031654 | ENSMUSP00000048573 | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha; Converts 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid or LPA) into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone. | 0.414 |
Pomp | Rbms3 | ENSMUSP00000031654 | ENSMUSP00000131371 | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.490 |
Pomp | Tmem136 | ENSMUSP00000031654 | ENSMUSP00000051435 | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | TLC domain-containing protein 5. | 0.682 |
Pramef20 | 1500011B03Rik | ENSMUSP00000112488 | ENSMUSP00000098411 | PRAME family member 20. | RIKEN cDNA 1500011B03 gene. | 0.645 |
Pramef20 | Cldn34b2 | ENSMUSP00000112488 | ENSMUSP00000075967 | PRAME family member 20. | Claudin 34B2. | 0.696 |
Pramef20 | Tmem136 | ENSMUSP00000112488 | ENSMUSP00000051435 | PRAME family member 20. | TLC domain-containing protein 5. | 0.489 |
Rbms3 | Pomp | ENSMUSP00000131371 | ENSMUSP00000031654 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | 0.490 |
Rbms3 | Tmem136 | ENSMUSP00000131371 | ENSMUSP00000051435 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | TLC domain-containing protein 5. | 0.635 |
Ssh3 | Tmem136 | ENSMUSP00000047718 | ENSMUSP00000051435 | Protein phosphatase Slingshot homolog 3; Protein phosphatase which may play a role in the regulation of actin filament dynamics. Can dephosphorylate and activate the actin binding/depolymerizing factor cofilin, which subsequently binds to actin filaments and stimulates their disassembly. | TLC domain-containing protein 5. | 0.502 |
Tmem136 | 1500011B03Rik | ENSMUSP00000051435 | ENSMUSP00000098411 | TLC domain-containing protein 5. | RIKEN cDNA 1500011B03 gene. | 0.511 |
Tmem136 | Agpat1 | ENSMUSP00000051435 | ENSMUSP00000048573 | TLC domain-containing protein 5. | 1-acyl-sn-glycerol-3-phosphate acyltransferase alpha; Converts 1-acyl-sn-glycerol-3-phosphate (lysophosphatidic acid or LPA) into 1,2-diacyl-sn-glycerol-3-phosphate (phosphatidic acid or PA) by incorporating an acyl moiety at the sn-2 position of the glycerol backbone. | 0.549 |
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