Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Fau | Gm13103 | ENSMUSP00000136358 | ENSMUSP00000092099 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | Predicted gene, OTTMUSG00000010433. | 0.911 |
Fau | Oog2 | ENSMUSP00000136358 | ENSMUSP00000079267 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | Oogenesin-2. | 0.911 |
Fau | Oog3 | ENSMUSP00000136358 | ENSMUSP00000059834 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | Oogenesin-3; Belongs to the PRAME family. | 0.911 |
Fau | Oog4 | ENSMUSP00000136358 | ENSMUSP00000073325 | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | Oog4 protein. | 0.911 |
Gm13103 | Fau | ENSMUSP00000092099 | ENSMUSP00000136358 | Predicted gene, OTTMUSG00000010433. | Ubiquitin-like protein FUBI; Belongs to the ubiquitin family. | 0.911 |
Gm13103 | Oog2 | ENSMUSP00000092099 | ENSMUSP00000079267 | Predicted gene, OTTMUSG00000010433. | Oogenesin-2. | 0.752 |
Gm13103 | Oog3 | ENSMUSP00000092099 | ENSMUSP00000059834 | Predicted gene, OTTMUSG00000010433. | Oogenesin-3; Belongs to the PRAME family. | 0.774 |
Gm13103 | Oog4 | ENSMUSP00000092099 | ENSMUSP00000073325 | Predicted gene, OTTMUSG00000010433. | Oog4 protein. | 0.774 |
Gm13103 | Pramef12 | ENSMUSP00000092099 | ENSMUSP00000030326 | Predicted gene, OTTMUSG00000010433. | PRAME family member 12. | 0.753 |
Gm13103 | Pramel1 | ENSMUSP00000092099 | ENSMUSP00000043718 | Predicted gene, OTTMUSG00000010433. | Preferentially expressed antigen in melanoma-like protein 1; May play a role in acrosome development and also in sperm maturation and motility; Belongs to the PRAME family. | 0.755 |
Nlrp4b | Obox2 | ENSMUSP00000113095 | ENSMUSP00000042995 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oocyte-specific homeobox 2. | 0.807 |
Nlrp4b | Obox7 | ENSMUSP00000113095 | ENSMUSP00000138932 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oocyte-specific homeobox 7. | 0.809 |
Nlrp4b | Oog2 | ENSMUSP00000113095 | ENSMUSP00000079267 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oogenesin-2. | 0.845 |
Nlrp4b | Oog3 | ENSMUSP00000113095 | ENSMUSP00000059834 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oogenesin-3; Belongs to the PRAME family. | 0.871 |
Nlrp4b | Oog4 | ENSMUSP00000113095 | ENSMUSP00000073325 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oog4 protein. | 0.883 |
Nlrp4b | Oosp3 | ENSMUSP00000113095 | ENSMUSP00000064913 | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | Oocyte-secreted protein 3; Belongs to the PLAC1 family. | 0.728 |
Obox2 | Nlrp4b | ENSMUSP00000042995 | ENSMUSP00000113095 | Oocyte-specific homeobox 2. | NACHT, LRR and PYD domains-containing protein 4B; May be involved in inflammation and recognition of cytosolic pathogen-associated molecular patterns (PAMPs) not intercepted by membrane-bound receptors. | 0.807 |
Obox2 | Obox7 | ENSMUSP00000042995 | ENSMUSP00000138932 | Oocyte-specific homeobox 2. | Oocyte-specific homeobox 7. | 0.815 |
Obox2 | Oog2 | ENSMUSP00000042995 | ENSMUSP00000079267 | Oocyte-specific homeobox 2. | Oogenesin-2. | 0.696 |
Obox2 | Oog3 | ENSMUSP00000042995 | ENSMUSP00000059834 | Oocyte-specific homeobox 2. | Oogenesin-3; Belongs to the PRAME family. | 0.828 |
page 1 of 4