Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Acp4 | Ssu2 | ENSMUSP00000112922 | ENSMUSP00000052328 | Testicular acid phosphatase; May dephosphorylate receptor tyrosine-protein kinase ERBB4 and inhibits its ligand-induced proteolytic cleavage. May play a role in odontogenesis; Belongs to the histidine acid phosphatase family. | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.493 |
Habp4 | Ssu2 | ENSMUSP00000021929 | ENSMUSP00000052328 | Intracellular hyaluronan-binding protein 4; RNA-binding protein that plays a role in the regulation of transcription, pre-mRNA splicing and mRNA translation. Negatively regulates DNA-binding activity of the transcription factor MEF2C in myocardial cells in response to mechanical stress. Plays a role in pre- mRNA splicing regulation. Binds (via C-terminus) to poly(U) RNA. Involved in mRNA translation regulation, probably at the initiation step. Seems to play a role in PML-nuclear bodies formation (By similarity). | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.445 |
Ogdhl | Ssu2 | ENSMUSP00000022480 | ENSMUSP00000052328 | Oxoglutarate dehydrogenase-like. | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.427 |
Smoc2 | Ssu2 | ENSMUSP00000024660 | ENSMUSP00000052328 | SPARC-related modular calcium-binding protein 2; Can stimulate endothelial cell proliferation, migration, as well as angiogenesis (By similarity). Promotes matrix assembly and cell adhesiveness. | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.660 |
Ssu2 | Acp4 | ENSMUSP00000052328 | ENSMUSP00000112922 | Protein SSUH2 homolog; Plays a role in odontogenesis. | Testicular acid phosphatase; May dephosphorylate receptor tyrosine-protein kinase ERBB4 and inhibits its ligand-induced proteolytic cleavage. May play a role in odontogenesis; Belongs to the histidine acid phosphatase family. | 0.493 |
Ssu2 | Habp4 | ENSMUSP00000052328 | ENSMUSP00000021929 | Protein SSUH2 homolog; Plays a role in odontogenesis. | Intracellular hyaluronan-binding protein 4; RNA-binding protein that plays a role in the regulation of transcription, pre-mRNA splicing and mRNA translation. Negatively regulates DNA-binding activity of the transcription factor MEF2C in myocardial cells in response to mechanical stress. Plays a role in pre- mRNA splicing regulation. Binds (via C-terminus) to poly(U) RNA. Involved in mRNA translation regulation, probably at the initiation step. Seems to play a role in PML-nuclear bodies formation (By similarity). | 0.445 |
Ssu2 | Ogdhl | ENSMUSP00000052328 | ENSMUSP00000022480 | Protein SSUH2 homolog; Plays a role in odontogenesis. | Oxoglutarate dehydrogenase-like. | 0.427 |
Ssu2 | Smoc2 | ENSMUSP00000052328 | ENSMUSP00000024660 | Protein SSUH2 homolog; Plays a role in odontogenesis. | SPARC-related modular calcium-binding protein 2; Can stimulate endothelial cell proliferation, migration, as well as angiogenesis (By similarity). Promotes matrix assembly and cell adhesiveness. | 0.660 |
Ssu2 | Tctex1d1 | ENSMUSP00000052328 | ENSMUSP00000112019 | Protein SSUH2 homolog; Plays a role in odontogenesis. | Tctex1 domain-containing protein 1. | 0.598 |
Ssu2 | Vps4b | ENSMUSP00000052328 | ENSMUSP00000092230 | Protein SSUH2 homolog; Plays a role in odontogenesis. | Vacuolar protein sorting-associated protein 4B; Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth fact [...] | 0.666 |
Tctex1d1 | Ssu2 | ENSMUSP00000112019 | ENSMUSP00000052328 | Tctex1 domain-containing protein 1. | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.598 |
Vps4b | Ssu2 | ENSMUSP00000092230 | ENSMUSP00000052328 | Vacuolar protein sorting-associated protein 4B; Involved in late steps of the endosomal multivesicular bodies (MVB) pathway. Recognizes membrane-associated ESCRT-III assemblies and catalyzes their disassembly, possibly in combination with membrane fission. Redistributes the ESCRT-III components to the cytoplasm for further rounds of MVB sorting. MVBs contain intraluminal vesicles (ILVs) that are generated by invagination and scission from the limiting membrane of the endosome and mostly are delivered to lysosomes enabling degradation of membrane proteins, such as stimulated growth fact [...] | Protein SSUH2 homolog; Plays a role in odontogenesis. | 0.666 |