Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ccdc30 | Zfp691 | ENSMUSP00000158825 | ENSMUSP00000053013 | Coiled-coil domain-containing protein 30. | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.413 |
Fam149a | Zfp691 | ENSMUSP00000091245 | ENSMUSP00000053013 | Protein FAM149A; Belongs to the FAM149 family. | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.439 |
Rnf148 | Zfp691 | ENSMUSP00000100592 | ENSMUSP00000053013 | RING finger protein 148. | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.513 |
Rnf148 | Zfp804b | ENSMUSP00000100592 | ENSMUSP00000143568 | RING finger protein 148. | Zinc finger protein 804B. | 0.683 |
Trim28 | Zfp691 | ENSMUSP00000005705 | ENSMUSP00000053013 | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.513 |
Trim28 | Zfp804b | ENSMUSP00000005705 | ENSMUSP00000143568 | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | Zinc finger protein 804B. | 0.499 |
Zfp691 | Ccdc30 | ENSMUSP00000053013 | ENSMUSP00000158825 | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Coiled-coil domain-containing protein 30. | 0.413 |
Zfp691 | Fam149a | ENSMUSP00000053013 | ENSMUSP00000091245 | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Protein FAM149A; Belongs to the FAM149 family. | 0.439 |
Zfp691 | Rnf148 | ENSMUSP00000053013 | ENSMUSP00000100592 | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | RING finger protein 148. | 0.513 |
Zfp691 | Trim28 | ENSMUSP00000053013 | ENSMUSP00000005705 | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | 0.513 |
Zfp691 | Zfp804b | ENSMUSP00000053013 | ENSMUSP00000143568 | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | Zinc finger protein 804B. | 0.678 |
Zfp804b | Rnf148 | ENSMUSP00000143568 | ENSMUSP00000100592 | Zinc finger protein 804B. | RING finger protein 148. | 0.683 |
Zfp804b | Trim28 | ENSMUSP00000143568 | ENSMUSP00000005705 | Zinc finger protein 804B. | Transcription intermediary factor 1-beta; Nuclear corepressor for KRAB domain-containing zinc finger proteins (KRAB-ZFPs). Mediates gene silencing by recruiting CHD3, a subunit of the nucleosome remodeling and deacetylation (NuRD) complex, and SETDB1 (which specifically methylates histone H3 at 'Lys-9' (H3K9me)) to the promoter regions of KRAB target genes. Enhances transcriptional repression by coordinating the increase in H3K9me, the decrease in histone H3 'Lys-9 and 'Lys-14' acetylation (H3K9ac and H3K14ac, respectively) and the disposition of HP1 proteins to silence gene expression [...] | 0.499 |
Zfp804b | Zfp691 | ENSMUSP00000143568 | ENSMUSP00000053013 | Zinc finger protein 804B. | Zinc finger protein 691; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. | 0.678 |