STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Lypd10Ly6/PLAUR domain-containing 10. (246 aa)    
Predicted Functional Partners:
Pate9
Prostate and testis-expressed 9.
    
 
 0.700
Pate5
Prostate and testis-expressed 5.
   
  
 0.693
Ly6g6g
Lymphocyte antigen 6 complex, locus G6G.
      
 0.691
Pate12
Prostate and testis-expressed 12.
    
 
 0.678
Lypd9
LY6/PLAUR domain-containing 9.
   
  
 0.676
Pate8
Secreted TFP/Ly-6/uPAR protein PATE-G.
    
 
 0.676
Pate6
Prostate and testis-expressed 6.
      
 0.675
Ly6l
Lymphocyte antigen 6L.
      
 0.675
Pate7
Prostate and testis-expressed 7.
      
 0.670
Pate13
Prostate and testis-expressed 13.
      
 0.670
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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