Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cphx1 | E330034G19Rik | ENSMUSP00000139237 | ENSMUSP00000124917 | Cytoplasmic polyadenylated homeobox 1. | RIKEN cDNA E330034G19 gene. | 0.519 |
Cphx1 | Fbxw21 | ENSMUSP00000139237 | ENSMUSP00000056358 | Cytoplasmic polyadenylated homeobox 1. | F-box and WD-40 domain protein 21. | 0.557 |
Cphx1 | Ftdc | ENSMUSP00000139237 | ENSMUSP00000056475 | Cytoplasmic polyadenylated homeobox 1. | Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. | 0.512 |
E330034G19Rik | Cphx1 | ENSMUSP00000124917 | ENSMUSP00000139237 | RIKEN cDNA E330034G19 gene. | Cytoplasmic polyadenylated homeobox 1. | 0.519 |
E330034G19Rik | Fbxw21 | ENSMUSP00000124917 | ENSMUSP00000056358 | RIKEN cDNA E330034G19 gene. | F-box and WD-40 domain protein 21. | 0.686 |
E330034G19Rik | Ftdc | ENSMUSP00000124917 | ENSMUSP00000056475 | RIKEN cDNA E330034G19 gene. | Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. | 0.640 |
Ect2l | Fbxo48 | ENSMUSP00000093497 | ENSMUSP00000057901 | Epithelial cell-transforming sequence 2 oncogene-like. | F-box only protein 48. | 0.644 |
Ect2l | Fbxw21 | ENSMUSP00000093497 | ENSMUSP00000056358 | Epithelial cell-transforming sequence 2 oncogene-like. | F-box and WD-40 domain protein 21. | 0.510 |
Fbxo48 | Ect2l | ENSMUSP00000057901 | ENSMUSP00000093497 | F-box only protein 48. | Epithelial cell-transforming sequence 2 oncogene-like. | 0.644 |
Fbxo48 | Fbxw21 | ENSMUSP00000057901 | ENSMUSP00000056358 | F-box only protein 48. | F-box and WD-40 domain protein 21. | 0.604 |
Fbxw20 | Fbxw21 | ENSMUSP00000078503 | ENSMUSP00000056358 | F-box and WD-40 domain protein 12. | F-box and WD-40 domain protein 21. | 0.815 |
Fbxw20 | Mnat1 | ENSMUSP00000078503 | ENSMUSP00000021523 | F-box and WD-40 domain protein 12. | CDK-activating kinase assembly factor MAT1; Stabilizes the cyclin H-CDK7 complex to form a functional CDK-activating kinase (CAK) enzymatic complex. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminal domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Involved in cell cycle control and in RNA transcription by RNA polymerase II. | 0.507 |
Fbxw20 | Nlrp5 | ENSMUSP00000078503 | ENSMUSP00000015866 | F-box and WD-40 domain protein 12. | NACHT, LRR and PYD domains-containing protein 5; As a member of the subcortical maternal complex (SCMC), plays an essential role for zygotes to progress beyond the first embryonic cell divisions. | 0.807 |
Fbxw21 | Cphx1 | ENSMUSP00000056358 | ENSMUSP00000139237 | F-box and WD-40 domain protein 21. | Cytoplasmic polyadenylated homeobox 1. | 0.557 |
Fbxw21 | E330034G19Rik | ENSMUSP00000056358 | ENSMUSP00000124917 | F-box and WD-40 domain protein 21. | RIKEN cDNA E330034G19 gene. | 0.686 |
Fbxw21 | Ect2l | ENSMUSP00000056358 | ENSMUSP00000093497 | F-box and WD-40 domain protein 21. | Epithelial cell-transforming sequence 2 oncogene-like. | 0.510 |
Fbxw21 | Fbxo48 | ENSMUSP00000056358 | ENSMUSP00000057901 | F-box and WD-40 domain protein 21. | F-box only protein 48. | 0.604 |
Fbxw21 | Fbxw20 | ENSMUSP00000056358 | ENSMUSP00000078503 | F-box and WD-40 domain protein 21. | F-box and WD-40 domain protein 12. | 0.815 |
Fbxw21 | Ftdc | ENSMUSP00000056358 | ENSMUSP00000056475 | F-box and WD-40 domain protein 21. | Ferritin; Stores iron in a soluble, non-toxic, readily available form. Important for iron homeostasis. Iron is taken up in the ferrous form and deposited as ferric hydroxides after oxidation. | 0.654 |
Fbxw21 | Gm8926 | ENSMUSP00000056358 | ENSMUSP00000132103 | F-box and WD-40 domain protein 21. | Predicted gene 8926. | 0.552 |
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