STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Jakmip3Janus kinase and microtubule-interacting protein 3; Belongs to the JAKMIP family. (667 aa)    
Predicted Functional Partners:
Smco3
Single-pass membrane and coiled-coil domain-containing protein 3.
   
  
 0.574
Zfp787
Zinc finger protein 787; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family.
      
 0.520
Pyroxd1
Pyridine nucleotide-disulfide oxidoreductase domain-containing protein 1; Probable FAD-dependent oxidoreductase; involved in the cellular oxidative stress response (By similarity). Required for normal sarcomere structure and muscle fiber integrity (By similarity).
      
 0.514
Gm9780
Predicted gene 9780.
      
 0.512
Plac9b
Placenta specific 9b.
      
 0.499
Plac9a
Placenta-specific protein 9; Belongs to the PLAC9 family.
      
 0.489
Satl1
Spermidine/spermine N(1)-acetyltransferase-like protein 1; Belongs to the acetyltransferase family.
      
 0.483
Ica1l
Islet cell autoantigen 1-like protein.
   
  
 0.477
Myadml2
Myeloid-associated differentiation marker-like protein 2; Belongs to the MAL family.
      
 0.475
Rflna
Refilin-A; Involved in the regulation of the perinuclear actin network and nuclear shape through interaction with filamins. Plays an essential role in the formation of cartilaginous skeletal elements.
      
 0.453
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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