STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Chchd1Coiled-coil-helix-coiled-coil-helix domain-containing protein 1; Belongs to the mitochondrion-specific ribosomal protein mS37 family. (118 aa)    
Predicted Functional Partners:
Mrps28
28S ribosomal protein S28, mitochondrial; Belongs to the bacterial ribosomal protein bS1 family.
   
  0.994
Mrps16
28S ribosomal protein S16, mitochondrial; Belongs to the bacterial ribosomal protein bS16 family.
   
  0.993
Aurkaip1
Aurora kinase A-interacting protein; May act as a negative regulator of Aurora-A kinase, by down- regulation through proteasome-dependent degradation; Belongs to the mitochondrion-specific ribosomal protein mS38 family.
   
 0.993
Mrps18c
28S ribosomal protein S18c, mitochondrial; Belongs to the bacterial ribosomal protein bS18 family.
   
 0.991
Mrps23
28S ribosomal protein S23, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS23 family.
   
  0.991
Mrps33
28S ribosomal protein S33, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS33 family.
   
 0.991
Mrps11
28S ribosomal protein S11, mitochondrial; Belongs to the universal ribosomal protein uS11 family.
   
 0.991
Mrps7
28S ribosomal protein S7, mitochondrial; Belongs to the universal ribosomal protein uS7 family.
   
 0.991
Mrps21
28S ribosomal protein S21, mitochondrial; Belongs to the bacterial ribosomal protein bS21 family.
   
 0.991
Ptcd3
Pentatricopeptide repeat domain-containing protein 3, mitochondrial; Mitochondrial RNA-binding protein that has a role in mitochondrial translation.
   
 0.990
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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