Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
9930111J21Rik2 | Fgd4 | ENSMUSP00000090839 | ENSMUSP00000125174 | Interferon-gamma-inducible GTPase Ifggb1 protein. | FYVE, RhoGEF and PH domain-containing protein 4; Activates CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. Activates MAPK8 (By similarity). Plays a role in regulating the actin cytoskeleton and cell shape. Promotes the formation of lamellipodia. | 0.447 |
9930111J21Rik2 | Gm12689 | ENSMUSP00000090839 | ENSMUSP00000092562 | Interferon-gamma-inducible GTPase Ifggb1 protein. | Predicted gene 12689. | 0.608 |
9930111J21Rik2 | Grk4 | ENSMUSP00000090839 | ENSMUSP00000001112 | Interferon-gamma-inducible GTPase Ifggb1 protein. | G protein-coupled receptor kinase 4; Specifically phosphorylates the activated forms of G protein- coupled receptors; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | 0.463 |
9930111J21Rik2 | Plekhh3 | ENSMUSP00000090839 | ENSMUSP00000046044 | Interferon-gamma-inducible GTPase Ifggb1 protein. | Pleckstrin homology domain-containing family H member 3. | 0.478 |
9930111J21Rik2 | Tnfrsf26 | ENSMUSP00000090839 | ENSMUSP00000054938 | Interferon-gamma-inducible GTPase Ifggb1 protein. | Tumor necrosis factor receptor superfamily member 26. | 0.409 |
9930111J21Rik2 | Traf5 | ENSMUSP00000090839 | ENSMUSP00000082710 | Interferon-gamma-inducible GTPase Ifggb1 protein. | TNF receptor-associated factor 5; Adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases. Mediates activation of NF-kappa-B and probably JNK. Seems to be involved in apoptosis. Plays a role in mediating activation of NF- kappa-B by EIF2AK2/PKR. | 0.612 |
Fgd4 | 9930111J21Rik2 | ENSMUSP00000125174 | ENSMUSP00000090839 | FYVE, RhoGEF and PH domain-containing protein 4; Activates CDC42, a member of the Ras-like family of Rho- and Rac proteins, by exchanging bound GDP for free GTP. Activates MAPK8 (By similarity). Plays a role in regulating the actin cytoskeleton and cell shape. Promotes the formation of lamellipodia. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.447 |
Gm12689 | 9930111J21Rik2 | ENSMUSP00000092562 | ENSMUSP00000090839 | Predicted gene 12689. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.608 |
Gm12689 | Plekhh3 | ENSMUSP00000092562 | ENSMUSP00000046044 | Predicted gene 12689. | Pleckstrin homology domain-containing family H member 3. | 0.653 |
Grk4 | 9930111J21Rik2 | ENSMUSP00000001112 | ENSMUSP00000090839 | G protein-coupled receptor kinase 4; Specifically phosphorylates the activated forms of G protein- coupled receptors; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.463 |
Grk4 | Traf5 | ENSMUSP00000001112 | ENSMUSP00000082710 | G protein-coupled receptor kinase 4; Specifically phosphorylates the activated forms of G protein- coupled receptors; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | TNF receptor-associated factor 5; Adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases. Mediates activation of NF-kappa-B and probably JNK. Seems to be involved in apoptosis. Plays a role in mediating activation of NF- kappa-B by EIF2AK2/PKR. | 0.814 |
Plekhh3 | 9930111J21Rik2 | ENSMUSP00000046044 | ENSMUSP00000090839 | Pleckstrin homology domain-containing family H member 3. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.478 |
Plekhh3 | Gm12689 | ENSMUSP00000046044 | ENSMUSP00000092562 | Pleckstrin homology domain-containing family H member 3. | Predicted gene 12689. | 0.653 |
Tnfrsf26 | 9930111J21Rik2 | ENSMUSP00000054938 | ENSMUSP00000090839 | Tumor necrosis factor receptor superfamily member 26. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.409 |
Traf5 | 9930111J21Rik2 | ENSMUSP00000082710 | ENSMUSP00000090839 | TNF receptor-associated factor 5; Adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases. Mediates activation of NF-kappa-B and probably JNK. Seems to be involved in apoptosis. Plays a role in mediating activation of NF- kappa-B by EIF2AK2/PKR. | Interferon-gamma-inducible GTPase Ifggb1 protein. | 0.612 |
Traf5 | Grk4 | ENSMUSP00000082710 | ENSMUSP00000001112 | TNF receptor-associated factor 5; Adapter protein and signal transducer that links members of the tumor necrosis factor receptor family to different signaling pathways by association with the receptor cytoplasmic domain and kinases. Mediates activation of NF-kappa-B and probably JNK. Seems to be involved in apoptosis. Plays a role in mediating activation of NF- kappa-B by EIF2AK2/PKR. | G protein-coupled receptor kinase 4; Specifically phosphorylates the activated forms of G protein- coupled receptors; Belongs to the protein kinase superfamily. AGC Ser/Thr protein kinase family. GPRK subfamily. | 0.814 |