Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
1700010B08Rik | Fndc8 | ENSMUSP00000072830 | ENSMUSP00000018988 | RIKEN cDNA 1700010B08 gene. | Fibronectin type III domain-containing protein 8. | 0.656 |
1700010B08Rik | Tex13a | ENSMUSP00000072830 | ENSMUSP00000094038 | RIKEN cDNA 1700010B08 gene. | Testis-expressed 13A. | 0.527 |
4933405O20Rik | Ctag2 | ENSMUSP00000138215 | ENSMUSP00000033524 | Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial; Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers. | Cancer/testis antigen 2. | 0.514 |
4933405O20Rik | Tex13a | ENSMUSP00000138215 | ENSMUSP00000094038 | Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial; Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers. | Testis-expressed 13A. | 0.514 |
Ctag2 | 4933405O20Rik | ENSMUSP00000033524 | ENSMUSP00000138215 | Cancer/testis antigen 2. | Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial; Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers. | 0.514 |
Ctag2 | Tex13a | ENSMUSP00000033524 | ENSMUSP00000094038 | Cancer/testis antigen 2. | Testis-expressed 13A. | 0.561 |
Ctag2 | Tex29 | ENSMUSP00000033524 | ENSMUSP00000033909 | Cancer/testis antigen 2. | Testis-expressed protein 29. | 0.424 |
Fndc8 | 1700010B08Rik | ENSMUSP00000018988 | ENSMUSP00000072830 | Fibronectin type III domain-containing protein 8. | RIKEN cDNA 1700010B08 gene. | 0.656 |
Fndc8 | Tex13a | ENSMUSP00000018988 | ENSMUSP00000094038 | Fibronectin type III domain-containing protein 8. | Testis-expressed 13A. | 0.569 |
Tex13a | 1700010B08Rik | ENSMUSP00000094038 | ENSMUSP00000072830 | Testis-expressed 13A. | RIKEN cDNA 1700010B08 gene. | 0.527 |
Tex13a | 4933405O20Rik | ENSMUSP00000094038 | ENSMUSP00000138215 | Testis-expressed 13A. | Probable isocitrate dehydrogenase [NAD] gamma 2, mitochondrial; Regulatory subunit which plays a role in the allosteric regulation of the enzyme catalyzing the decarboxylation of isocitrate (ICT) into alpha-ketoglutarate. The heterodimer composed of the alpha (IDH3A) and beta (IDH3B) subunits and the heterodimer composed of the alpha (IDH3A) and gamma (IDH3G) subunits, have considerable basal activity but the full activity of the heterotetramer (containing two subunits of IDH3A, one of IDH3B and one of IDH3G) requires the assembly and cooperative function of both heterodimers. | 0.514 |
Tex13a | Ctag2 | ENSMUSP00000094038 | ENSMUSP00000033524 | Testis-expressed 13A. | Cancer/testis antigen 2. | 0.561 |
Tex13a | Fndc8 | ENSMUSP00000094038 | ENSMUSP00000018988 | Testis-expressed 13A. | Fibronectin type III domain-containing protein 8. | 0.569 |
Tex13a | Tex28 | ENSMUSP00000094038 | ENSMUSP00000109967 | Testis-expressed 13A. | Testis-expressed 28. | 0.689 |
Tex13a | Tex29 | ENSMUSP00000094038 | ENSMUSP00000033909 | Testis-expressed 13A. | Testis-expressed protein 29. | 0.570 |
Tex13a | Tex37 | ENSMUSP00000094038 | ENSMUSP00000066786 | Testis-expressed 13A. | Testis-expressed sequence 37 protein. | 0.507 |
Tex13a | Ubl4b | ENSMUSP00000094038 | ENSMUSP00000100577 | Testis-expressed 13A. | Ubiquitin-like protein 4B. | 0.513 |
Tex13a | Utp4 | ENSMUSP00000094038 | ENSMUSP00000048377 | Testis-expressed 13A. | U3 small nucleolar RNA-associated protein 4 homolog; Ribosome biogenesis factor. Involved in nucleolar processing of pre-18S ribosomal RNA. Involved in small subunit (SSU) pre-rRNA processing at sites A', A0, 1 and 2b. Required for optimal pre- ribosomal RNA transcription by RNA polymerase. May be a transcriptional regulator. Acts as a positive regulator of HIVEP1. | 0.532 |
Tex13a | Zfp711 | ENSMUSP00000094038 | ENSMUSP00000109036 | Testis-expressed 13A. | Zinc finger protein 711; Transcription regulator required for brain development. Probably acts as a transcription factor that binds to the promoter of target genes and recruits PHF8 histone demethylase, leading to activate expression of genes involved in neuron development, such as KDM5C (By similarity). | 0.497 |
Tex28 | Tex13a | ENSMUSP00000109967 | ENSMUSP00000094038 | Testis-expressed 28. | Testis-expressed 13A. | 0.689 |
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