STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Duxbl2Double homeobox B-like 2. (350 aa)    
Predicted Functional Partners:
Obox8
Oocyte-specific homeobox 8.
   
 
 0.610
Cphx2
Cytoplasmic polyadenylated homeobox 1.
      
 0.539
Frg2f1
FSHD region gene 2 family member 1.
      
 0.518
Rhox7b
Reproductive homeobox 7B.
    
 
 0.473
Gm9780
Predicted gene 9780.
      
 0.442
Plac9b
Placenta specific 9b.
      
 0.437
Plac9a
Placenta-specific protein 9; Belongs to the PLAC9 family.
      
 0.432
Crxos
Cone-rod homeobox, opposite strand.
    
 
 0.424
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.