Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ercc6l2 | Zxdb | ENSMUSP00000069488 | ENSMUSP00000100524 | DNA excision repair protein ERCC-6-like 2; May be involved in early DNA damage response. | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | 0.401 |
Fam8a1 | Zxdb | ENSMUSP00000097144 | ENSMUSP00000100524 | Family with sequence similarity 8, member A1. | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | 0.430 |
Hal | Zxdb | ENSMUSP00000123336 | ENSMUSP00000100524 | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | 0.506 |
Tmem164 | Zxdb | ENSMUSP00000108517 | ENSMUSP00000100524 | Transmembrane protein 164. | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | 0.465 |
Zxdb | Ercc6l2 | ENSMUSP00000100524 | ENSMUSP00000069488 | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | DNA excision repair protein ERCC-6-like 2; May be involved in early DNA damage response. | 0.401 |
Zxdb | Fam8a1 | ENSMUSP00000100524 | ENSMUSP00000097144 | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | Family with sequence similarity 8, member A1. | 0.430 |
Zxdb | Hal | ENSMUSP00000100524 | ENSMUSP00000123336 | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | Histidine ammonia-lyase; Belongs to the PAL/histidase family. | 0.506 |
Zxdb | Tmem164 | ENSMUSP00000100524 | ENSMUSP00000108517 | Zinc finger X-linked protein ZXDB; Cooperates with CIITA to promote transcription of MHC class I and MHC class II genes. | Transmembrane protein 164. | 0.465 |