STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
H2ac19H2A clustered histone 19. (130 aa)    
Predicted Functional Partners:
H4c12
H4 clustered histone 12.
 
 
 
 0.962
H4c8
H4 clustered histone 8.
 
 
 
 0.957
H4c1
H4 clustered histone 1.
 
 
 
 0.954
H4c14
H4 clustered histone 14.
 
 
 
 0.954
Hist1h4n
Histone cluster 1, H4n.
 
 
 
 0.953
H2bc8
H2B clustered histone 8.
 
 
 
 0.952
H4c4
H4 clustered histone 4.
 
 
 
 0.952
H4c6
H4 clustered histone 6.
 
 
 
 0.952
H4c2
H4 clustered histone 2.
 
 
 
 0.951
H4c3
H4 clustered histone 3.
 
 
 
 0.951
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.