Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| Arhgef17 | Ccdc80 | ENSMUSP00000102647 | ENSMUSP00000097097 | Rho guanine nucleotide exchange factor 17; Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases. | Coiled-coil domain-containing protein 80; Promotes cell adhesion and matrix assembly. | 0.412 |
| Arhgef17 | Rbms3 | ENSMUSP00000102647 | ENSMUSP00000131371 | Rho guanine nucleotide exchange factor 17; Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases. | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.516 |
| Ccdc80 | Arhgef17 | ENSMUSP00000097097 | ENSMUSP00000102647 | Coiled-coil domain-containing protein 80; Promotes cell adhesion and matrix assembly. | Rho guanine nucleotide exchange factor 17; Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases. | 0.412 |
| Ccdc80 | Rbms3 | ENSMUSP00000097097 | ENSMUSP00000131371 | Coiled-coil domain-containing protein 80; Promotes cell adhesion and matrix assembly. | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.529 |
| Iqsec3 | Rbms3 | ENSMUSP00000038653 | ENSMUSP00000131371 | IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1. Belongs to the BRAG family. | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.567 |
| Iqsec3 | Tmem236 | ENSMUSP00000038653 | ENSMUSP00000076722 | IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1. Belongs to the BRAG family. | Transmembrane protein 236. | 0.638 |
| Myc | Rbms3 | ENSMUSP00000022971 | ENSMUSP00000131371 | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release. | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.510 |
| Pomp | Rbms3 | ENSMUSP00000031654 | ENSMUSP00000131371 | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.490 |
| Pomp | Tmem136 | ENSMUSP00000031654 | ENSMUSP00000051435 | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | TLC domain-containing protein 5. | 0.682 |
| Rbms3 | Arhgef17 | ENSMUSP00000131371 | ENSMUSP00000102647 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Rho guanine nucleotide exchange factor 17; Acts as guanine nucleotide exchange factor (GEF) for RhoA GTPases. | 0.516 |
| Rbms3 | Ccdc80 | ENSMUSP00000131371 | ENSMUSP00000097097 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Coiled-coil domain-containing protein 80; Promotes cell adhesion and matrix assembly. | 0.529 |
| Rbms3 | Iqsec3 | ENSMUSP00000131371 | ENSMUSP00000038653 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | IQ motif and SEC7 domain-containing protein 3; Acts as a guanine nucleotide exchange factor (GEF) for ARF1. Belongs to the BRAG family. | 0.567 |
| Rbms3 | Myc | ENSMUSP00000131371 | ENSMUSP00000022971 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Myc proto-oncogene protein; Transcription factor that binds DNA in a non-specific manner, yet also specifically recognizes the core sequence 5'-CAC[GA]TG-3'. Activates the transcription of growth-related genes. Binds to the VEGFA promoter, promoting VEGFA production and subsequent sprouting angiogenesis. Regulator of somatic reprogramming, controls self-renewal of embryonic stem cells. Functions with TAF6L to activate target gene expression through RNA polymerase II pause release. | 0.510 |
| Rbms3 | Pomp | ENSMUSP00000131371 | ENSMUSP00000031654 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Proteasome maturation protein; Molecular chaperone essential for the assembly of standard proteasomes and immunoproteasomes. Degraded after completion of proteasome maturation (By similarity). Mediates the association of 20S preproteasome with the endoplasmic reticulum (By similarity). | 0.490 |
| Rbms3 | Slc15a4 | ENSMUSP00000131371 | ENSMUSP00000031367 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Solute carrier family 15 member 4; Proton oligopeptide cotransporter. Transports free histidine and certain di- and tripeptides (By similarity); Belongs to the PTR2/POT transporter (TC 2.A.17) family. | 0.607 |
| Rbms3 | Tmem136 | ENSMUSP00000131371 | ENSMUSP00000051435 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | TLC domain-containing protein 5. | 0.635 |
| Rbms3 | Tmem236 | ENSMUSP00000131371 | ENSMUSP00000076722 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Transmembrane protein 236. | 0.542 |
| Rbms3 | Tprg | ENSMUSP00000131371 | ENSMUSP00000052585 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Tumor protein p63-regulated gene 1 protein. | 0.527 |
| Rbms3 | Zmym5 | ENSMUSP00000131371 | ENSMUSP00000134057 | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | Zinc finger MYM-type protein 5; Functions as a transcriptional regulator. | 0.602 |
| Slc15a4 | Rbms3 | ENSMUSP00000031367 | ENSMUSP00000131371 | Solute carrier family 15 member 4; Proton oligopeptide cotransporter. Transports free histidine and certain di- and tripeptides (By similarity); Belongs to the PTR2/POT transporter (TC 2.A.17) family. | RNA-binding motif, single-stranded-interacting protein 3; Binds poly(A) and poly(U) oligoribonucleotides. | 0.607 |
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