STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Obp2bOdorant-binding protein 2B; Belongs to the calycin superfamily. Lipocalin family. (176 aa)    
Predicted Functional Partners:
Bpifa6
BPI fold-containing family A, member 6.
   
  
 0.770
Obp1b
Odorant-binding protein 1b; Binds the chemical odorant 2-isobutyl-3-methoxypyrazine.
   
  
 0.723
Lcn11
Lipocalin 11; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.701
Obp1a
Odorant-binding protein 1a; Binds the chemical odorant 2-isobutyl-3-methoxypyrazine.
   
  
 0.662
Gm5938
Predicted gene 5938; Belongs to the calycin superfamily. Lipocalin family.
      
 0.660
Lcn8
Epididymal-specific lipocalin-8; May play a role in male fertility. May act as a retinoid carrier protein within the epididymis.
      
 0.636
Gm14744
Predicted gene 14744; Belongs to the calycin superfamily. Lipocalin family.
   
  
 0.606
Bpifb5
BPI fold-containing family B, member 5.
   
  
 0.577
Ttll11
Tubulin polyglutamylase TTLL11; Polyglutamase which preferentially modifies alpha-tubulin. Involved in the side-chain elongation step of the polyglutamylation reaction rather than in the initiation step. Required for CCSAP localization to both spindle and cilia microtubules. Generates long side-chains. Belongs to the tubulin--tyrosine ligase family.
      
 0.575
Lcn12
Epididymal-specific lipocalin-12; Binds all-trans retinoic acid and may act as a retinoid carrier protein within the epididymis. May play a role in male fertility (By similarity); Belongs to the calycin superfamily. Lipocalin family.
      
 0.552
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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