STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Xlr4cX-linked lymphocyte-regulated 4C. (215 aa)    
Predicted Functional Partners:
Xlr4b
X-linked lymphocyte regulated gene 4.
  
   
0.814
Xlr4a
X-linked lymphocyte-regulated 4A.
  
  
0.794
Xlr
X-linked lymphocyte-regulated protein PM1.
  
  
 0.738
1700018B08Rik
RIKEN cDNA 1700018B08 gene.
      
 0.601
1700013H16Rik
RIKEN cDNA 1700013H16 gene.
  
   
 0.528
Fam90a1b
Family with sequence similarity 90, member A1B.
      
 0.513
Fam90a1b-2
Uncharacterized protein.
   
  
 0.496
Gm5127
Predicted gene, EG331493.
      
 0.487
Gm5862
Predicted gene 5862.
    
 
 0.478
4930572O03Rik
RIKEN cDNA 4930572O03 gene.
    
 
 0.478
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.