STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Mrpl3939S ribosomal protein L39, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL39 family. (336 aa)    
Predicted Functional Partners:
Mrpl3
39S ribosomal protein L3, mitochondrial; Belongs to the universal ribosomal protein uL3 family.
   
 
 0.972
Mrpl1
39S ribosomal protein L1, mitochondrial.
   
 
 0.968
Mrps31
28S ribosomal protein S31, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mS31 family.
   
 
 0.963
Mrpl22
39S ribosomal protein L22, mitochondrial; Belongs to the universal ribosomal protein uL22 family.
   
 
 0.962
Mrpl16
39S ribosomal protein L16, mitochondrial; Belongs to the universal ribosomal protein uL16 family.
   
 
 0.958
Mrpl32
39S ribosomal protein L32, mitochondrial; Belongs to the bacterial ribosomal protein bL32 family.
  
   0.957
Mrpl45
39S ribosomal protein L45, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL45 family.
   
 
 0.955
Mrpl50
39S ribosomal protein L50, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL50 family.
   
 
 0.954
Mrps15
28S ribosomal protein S15, mitochondrial; Belongs to the universal ribosomal protein uS15 family.
  
 
 0.949
Mrpl46
39S ribosomal protein L46, mitochondrial; Belongs to the mitochondrion-specific ribosomal protein mL46 family.
   
 
 0.948
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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