Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Ascc1 | Spock2 | ENSMUSP00000126301 | ENSMUSP00000113115 | Activating signal cointegrator 1 complex subunit 1; Plays a role in DNA damage repair as component of the ASCC complex. Part of the ASC-1 complex that enhances NF-kappa-B, SRF and AP1 transactivation. In cells responding to gastrin-activated paracrine signals, it is involved in the induction of SERPINB2 expression by gastrin. May also play a role in the development of neuromuscular junction. | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | 0.427 |
Mmp16 | Spock2 | ENSMUSP00000029881 | ENSMUSP00000113115 | Matrix metalloproteinase-16; Endopeptidase that degrades various components of the extracellular matrix, such as collagen type III and fibronectin. Activates progelatinase A. Involved in the matrix remodeling of blood vessels. It has no effect on type I, II, IV and V collagen. However, upon interaction with CSPG4, it may be involved in degradation and invasion of type I collagen by melanoma cells (By similarity). | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | 0.447 |
Sparcl1 | Spock2 | ENSMUSP00000031249 | ENSMUSP00000113115 | SPARC-like protein 1; Belongs to the SPARC family. | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | 0.446 |
Spock2 | Ascc1 | ENSMUSP00000113115 | ENSMUSP00000126301 | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | Activating signal cointegrator 1 complex subunit 1; Plays a role in DNA damage repair as component of the ASCC complex. Part of the ASC-1 complex that enhances NF-kappa-B, SRF and AP1 transactivation. In cells responding to gastrin-activated paracrine signals, it is involved in the induction of SERPINB2 expression by gastrin. May also play a role in the development of neuromuscular junction. | 0.427 |
Spock2 | Mmp16 | ENSMUSP00000113115 | ENSMUSP00000029881 | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | Matrix metalloproteinase-16; Endopeptidase that degrades various components of the extracellular matrix, such as collagen type III and fibronectin. Activates progelatinase A. Involved in the matrix remodeling of blood vessels. It has no effect on type I, II, IV and V collagen. However, upon interaction with CSPG4, it may be involved in degradation and invasion of type I collagen by melanoma cells (By similarity). | 0.447 |
Spock2 | Sparcl1 | ENSMUSP00000113115 | ENSMUSP00000031249 | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | SPARC-like protein 1; Belongs to the SPARC family. | 0.446 |
Spock2 | Wfdc1 | ENSMUSP00000113115 | ENSMUSP00000024107 | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | WAP four-disulfide core domain protein 1; Has growth inhibitory activity. | 0.454 |
Wfdc1 | Spock2 | ENSMUSP00000024107 | ENSMUSP00000113115 | WAP four-disulfide core domain protein 1; Has growth inhibitory activity. | Testican-2; May participate in diverse steps of neurogenesis. Binds calcium (By similarity). | 0.454 |