Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Irx2 | Pou6f2 | ENSMUSP00000073976 | ENSMUSP00000114173 | Iroquois-class homeodomain protein IRX-2. | POU domain, class 6, transcription factor 2; Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3' (By similarity). Belongs to the POU transcription factor family. Class-6 subfamily. | 0.497 |
Pou6f2 | Irx2 | ENSMUSP00000114173 | ENSMUSP00000073976 | POU domain, class 6, transcription factor 2; Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3' (By similarity). Belongs to the POU transcription factor family. Class-6 subfamily. | Iroquois-class homeodomain protein IRX-2. | 0.497 |
Pou6f2 | Zfp180 | ENSMUSP00000114173 | ENSMUSP00000064611 | POU domain, class 6, transcription factor 2; Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3' (By similarity). Belongs to the POU transcription factor family. Class-6 subfamily. | Zinc finger protein 180. | 0.523 |
Zfp180 | Pou6f2 | ENSMUSP00000064611 | ENSMUSP00000114173 | Zinc finger protein 180. | POU domain, class 6, transcription factor 2; Probable transcription factor likely to be involved in early steps in the differentiation of amacrine and ganglion cells. Recognizes and binds to the DNA sequence 5'-ATGCAAAT-3' (By similarity). Belongs to the POU transcription factor family. Class-6 subfamily. | 0.523 |