STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
2310050C09RikRIKEN cDNA 2310050C09 gene. (280 aa)    
Predicted Functional Partners:
Lce1c
Late cornified envelope 1C.
   
  
 0.916
Lce1b
Late cornified envelope 1B.
   
  
 0.901
Lce1a2
Late cornified envelope 1A2.
   
  
 0.893
Lce1d
Late cornified envelope 1D.
   
  
 0.854
Lce6a
Late cornified envelope 6A.
   
  
 0.833
Lce1m
Late cornified envelope 1M.
   
    0.805
Lce1a1
Late cornified envelope 1A1.
   
    0.805
Lce1e
Late cornified envelope 1E.
   
  
 0.787
Kprp
Keratinocyte proline-rich protein.
   
 
0.731
Lce3b
Late cornified envelope 3B.
   
 
 0.635
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.