Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Cntn5 | Jrkl | ENSMUSP00000124327 | ENSMUSP00000128798 | Contactin-5; Contactins mediate cell surface interactions during nervous system development. Has some neurite outgrowth-promoting activity in the cerebral cortical neurons but not in hippocampal neurons (By similarity). Involved in neuronal activity in the auditory system. | Jerky protein homolog-like. | 0.689 |
Fsip1 | Jrkl | ENSMUSP00000028821 | ENSMUSP00000128798 | Fibrous sheath-interacting protein 1; Belongs to the FSIP1 family. | Jerky protein homolog-like. | 0.458 |
Ginm1 | Gpr153 | ENSMUSP00000119129 | ENSMUSP00000101276 | Glycoprotein integral membrane protein 1. | Probable G-protein coupled receptor 153; Orphan receptor; Belongs to the G-protein coupled receptor 1 family. | 0.523 |
Ginm1 | Hbs1l | ENSMUSP00000119129 | ENSMUSP00000151689 | Glycoprotein integral membrane protein 1. | HBS1-like protein. | 0.527 |
Ginm1 | Jrkl | ENSMUSP00000119129 | ENSMUSP00000128798 | Glycoprotein integral membrane protein 1. | Jerky protein homolog-like. | 0.538 |
Ginm1 | Krtap11-1 | ENSMUSP00000119129 | ENSMUSP00000129948 | Glycoprotein integral membrane protein 1. | Keratin-associated protein 11-1. | 0.538 |
Ginm1 | Lctl | ENSMUSP00000119129 | ENSMUSP00000034969 | Glycoprotein integral membrane protein 1. | Lactase-like protein; Plays a role in formation of the lens suture in the eye, which is important for normal optical properties of the lens. Belongs to the glycosyl hydrolase 1 family. Klotho subfamily. | 0.538 |
Ginm1 | Paqr5 | ENSMUSP00000119129 | ENSMUSP00000034817 | Glycoprotein integral membrane protein 1. | Membrane progestin receptor gamma; Plasma membrane progesterone (P4) receptor coupled to G proteins. Seems to act through a G(i) mediated pathway. May be involved in oocyte maturation. | 0.523 |
Gpr153 | Ginm1 | ENSMUSP00000101276 | ENSMUSP00000119129 | Probable G-protein coupled receptor 153; Orphan receptor; Belongs to the G-protein coupled receptor 1 family. | Glycoprotein integral membrane protein 1. | 0.523 |
Gpr153 | Jrkl | ENSMUSP00000101276 | ENSMUSP00000128798 | Probable G-protein coupled receptor 153; Orphan receptor; Belongs to the G-protein coupled receptor 1 family. | Jerky protein homolog-like. | 0.447 |
Hbs1l | Ginm1 | ENSMUSP00000151689 | ENSMUSP00000119129 | HBS1-like protein. | Glycoprotein integral membrane protein 1. | 0.527 |
Hbs1l | Jrkl | ENSMUSP00000151689 | ENSMUSP00000128798 | HBS1-like protein. | Jerky protein homolog-like. | 0.446 |
Jrkl | Cntn5 | ENSMUSP00000128798 | ENSMUSP00000124327 | Jerky protein homolog-like. | Contactin-5; Contactins mediate cell surface interactions during nervous system development. Has some neurite outgrowth-promoting activity in the cerebral cortical neurons but not in hippocampal neurons (By similarity). Involved in neuronal activity in the auditory system. | 0.689 |
Jrkl | Fsip1 | ENSMUSP00000128798 | ENSMUSP00000028821 | Jerky protein homolog-like. | Fibrous sheath-interacting protein 1; Belongs to the FSIP1 family. | 0.458 |
Jrkl | Ginm1 | ENSMUSP00000128798 | ENSMUSP00000119129 | Jerky protein homolog-like. | Glycoprotein integral membrane protein 1. | 0.538 |
Jrkl | Gpr153 | ENSMUSP00000128798 | ENSMUSP00000101276 | Jerky protein homolog-like. | Probable G-protein coupled receptor 153; Orphan receptor; Belongs to the G-protein coupled receptor 1 family. | 0.447 |
Jrkl | Hbs1l | ENSMUSP00000128798 | ENSMUSP00000151689 | Jerky protein homolog-like. | HBS1-like protein. | 0.446 |
Jrkl | Krtap11-1 | ENSMUSP00000128798 | ENSMUSP00000129948 | Jerky protein homolog-like. | Keratin-associated protein 11-1. | 0.523 |
Jrkl | Lctl | ENSMUSP00000128798 | ENSMUSP00000034969 | Jerky protein homolog-like. | Lactase-like protein; Plays a role in formation of the lens suture in the eye, which is important for normal optical properties of the lens. Belongs to the glycosyl hydrolase 1 family. Klotho subfamily. | 0.522 |
Jrkl | Med7 | ENSMUSP00000128798 | ENSMUSP00000104855 | Jerky protein homolog-like. | Mediator of RNA polymerase II transcription subunit 7; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors (By similarity). | 0.460 |
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