STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Gm19402Predicted gene, 19402. (266 aa)    
Predicted Functional Partners:
Gm3233
Predicted gene 3233.
  
 
 
0.938
Gm19668
Predicted gene, 19668.
  
 
 
0.888
Gm3238
Predicted gene 3238.
  
 
 
0.884
Gm7138
Predicted gene 7138.
  
 
 
0.884
Gm3250
Predicted gene 3250.
  
 
 
0.884
Gm9507
Predicted gene 9507.
   
 
 
0.876
Gm10024
Keratin-associated protein 12-1; In the hair cortex, hair keratin intermediate filaments are embedded in an interfilamentous matrix, consisting of hair keratin- associated proteins (KRTAP), which are essential for the formation of a rigid and resistant hair shaft through their extensive disulfide bond cross-linking with abundant cysteine residues of hair keratins. The matrix proteins include the high-sulfur and high-glycine-tyrosine keratins (By similarity).
  
   
0.820
Gm7137
Predicted gene 7137.
  
 
 
0.759
Krtap12-1
Keratin associated protein 12-1.
  
   
0.754
Krtap10-4
Keratin associated protein 10-4.
  
 
0.650
Your Current Organism:
Mus musculus
NCBI taxonomy Id: 10090
Other names: LK3 transgenic mice, M. musculus, Mus sp. 129SV, house mouse, mouse, nude mice, transgenic mice
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