Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
Nr2e3 | Samd11 | ENSMUSP00000034831 | ENSMUSP00000136611 | Photoreceptor-specific nuclear receptor; Orphan nuclear receptor of retinal photoreceptor cells. Transcriptional factor that is an activator of rod development and repressor of cone development. Binds the promoter region of a number of rod- and cone-specific genes, including rhodopsin, M- and S-opsin and rod-specific phosphodiesterase beta subunit. Enhances rhodopsin expression. Represses M- and S-cone opsin expression. | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | 0.402 |
Plekhn1 | Pusl1 | ENSMUSP00000101194 | ENSMUSP00000095344 | Kelch-like protein 17; Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function (By similarity). | tRNA pseudouridine synthase-like 1; Belongs to the tRNA pseudouridine synthase TruA family. | 0.451 |
Plekhn1 | Samd11 | ENSMUSP00000101194 | ENSMUSP00000136611 | Kelch-like protein 17; Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function (By similarity). | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | 0.478 |
Pusl1 | Plekhn1 | ENSMUSP00000095344 | ENSMUSP00000101194 | tRNA pseudouridine synthase-like 1; Belongs to the tRNA pseudouridine synthase TruA family. | Kelch-like protein 17; Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function (By similarity). | 0.451 |
Pusl1 | Samd11 | ENSMUSP00000095344 | ENSMUSP00000136611 | tRNA pseudouridine synthase-like 1; Belongs to the tRNA pseudouridine synthase TruA family. | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | 0.422 |
Samd11 | Nr2e3 | ENSMUSP00000136611 | ENSMUSP00000034831 | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | Photoreceptor-specific nuclear receptor; Orphan nuclear receptor of retinal photoreceptor cells. Transcriptional factor that is an activator of rod development and repressor of cone development. Binds the promoter region of a number of rod- and cone-specific genes, including rhodopsin, M- and S-opsin and rod-specific phosphodiesterase beta subunit. Enhances rhodopsin expression. Represses M- and S-cone opsin expression. | 0.402 |
Samd11 | Plekhn1 | ENSMUSP00000136611 | ENSMUSP00000101194 | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | Kelch-like protein 17; Substrate-recognition component of some cullin-RING-based BCR (BTB-CUL3-RBX1) E3 ubiquitin-protein ligase complex. The BCR(KLHL17) mediates the ubiquitination and subsequenct degradation of GLUR6. May play a role in the actin-based neuronal function (By similarity). | 0.478 |
Samd11 | Pusl1 | ENSMUSP00000136611 | ENSMUSP00000095344 | Sterile alpha motif domain-containing protein 11; May play a role in photoreceptor development. | tRNA pseudouridine synthase-like 1; Belongs to the tRNA pseudouridine synthase TruA family. | 0.422 |