STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Pnma1Paraneoplastic antigen MA1. (353 aa)    
Predicted Functional Partners:
Fancm
Fanconi anemia, complementation group M.
    
 0.965
Kctd20
Potassium channel tetramerisation domain containing 20.
      
 0.597
Zic4
Zinc finger protein of the cerebellum 4.
    
 
 0.596
Dner
Delta/notch-like EGF repeat containing.
   
 0.585
Mtcl1
Microtubule crosslinking factor 1.
      
 0.582
ENSMSIP00000015787
annotation not available
     
 0.568
Rcvrn
Recoverin.
    
 
 0.557
Arhgap26
Rho GTPase activating protein 26.
      
 0.555
ENSMSIP00000004201
annotation not available
    
 0.552
Ywhab
Tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta polypeptide.
    
 
 0.549
Your Current Organism:
Mus spicilegus
NCBI taxonomy Id: 10103
Other names: M. spicilegus, Mus hortulanus, mound-building mouse, steppe mouse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.