STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Megf6Multiple epidermal growth factor-like domains protein 6. (1574 aa)    
Predicted Functional Partners:
Ctnnal1
Catenin (Cadherin associated protein), alpha-like 1 (Predicted).
    
 
 0.672
Creg1
Cellular repressor of E1A-stimulated genes (Predicted), isoform CRA_b; Belongs to the CREG family.
      
 0.634
Dlk2
Protein delta homolog 2; Regulates adipogenesis.
      
 0.625
Mtcl1
Microtubule crosslinking factor 1.
      
 0.614
Mfap5
Microfibrillar associated protein 5 (Predicted), isoform CRA_a.
   
  
 0.588
Lrrc45
Leucine-rich repeat-containing 45.
    
 
 0.563
Tm7sf2
Transmembrane 7 superfamily member 2.
    
 
 0.540
Morn1
MORN repeat-containing protein 1.
    
 
 0.533
Man1c1
alpha-1,2-Mannosidase; Belongs to the glycosyl hydrolase 47 family.
      
 0.503
Wrap73
WD repeat containing, antisense to Trp73.
    
 
 0.492
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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