STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SvopSynaptic vesicle 2-related protein; Belongs to the major facilitator superfamily. (548 aa)    
Predicted Functional Partners:
Mfsd9
Major facilitator superfamily domain-containing 9.
   
  
 0.807
Spns1
Protein spinster homolog 1; Sphingolipid transporter. May be involved in necrotic or autophagic cell death (By similarity); Belongs to the major facilitator superfamily. Spinster (TC 2.A.1.49) family.
      
 0.739
Unc93a
Unc-93 homolog A.
      
 0.732
Mfsd10
Major facilitator superfamily domain-containing 10.
   
  
 0.707
Mfsd11
Major facilitator superfamily domain-containing 11.
      
 0.697
Spns3
Sphingolipid transporter 3.
      
 0.695
Mfsd6
Similar to expressed sequence AW212394 (Predicted).
   
  
 0.689
Mfsd14a
Hippocampus abundant gene transcript 1 (Predicted).
   
  
 0.671
Mfsd5
Major facilitator superfamily domain-containing 5.
      
 0.669
Hiatl3
Hippocampus abundant transcript-like 3.
   
  
 0.669
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.