STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Zfp672Zinc finger protein 672; May be involved in transcriptional regulation; Belongs to the krueppel C2H2-type zinc-finger protein family. (468 aa)    
Predicted Functional Partners:
Mrps9
Mitochondrial ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.628
Tmem132d
Transmembrane protein 132D; May serve as a cell-surface marker for oligodendrocyte differentiation; Belongs to the TMEM132 family.
      
 0.535
Rpl23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
 
 0.527
Zfp622
Zinc finger protein 622.
   
 
 0.527
Haus5
HAUS augmin-like complex, subunit 5.
      
 0.512
Zfp644
Zinc finger protein 644 (Predicted), isoform CRA_a.
   
  
 0.509
Coro7-2
Coronin-7; F-actin regulator involved in anterograde Golgi to endosome transport: upon ubiquitination via 'Lys-33'-linked ubiquitin chains by the BCR(KLHL20) E3 ubiquitin ligase complex, interacts with EPS15 and localizes to the trans-Golgi network, where it promotes actin polymerization, thereby facilitating post-Golgi trafficking. May play a role in the maintenance of the Golgi apparatus morphology (By similarity).
      
 0.506
Slc25a17
Solute carrier family 25 member 17; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
  
 0.503
Ggnbp2
Gametogenetin-binding protein 2; May be involved in spermatogenesis.
    
 
 0.502
Hip1
Huntingtin interacting protein 1, isoform CRA_a.
      
 0.499
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.