STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Cog1Component of oligomeric golgi complex 1. (980 aa)    
Predicted Functional Partners:
Cog8
Conserved oligomeric Golgi complex subunit 8; Belongs to the COG8 family.
   
 0.996
Cog2
Component of oligomeric golgi complex 2.
   
 0.995
Cog5
Component of oligomeric golgi complex 5.
    
 0.995
Cog6
Conserved oligomeric Golgi complex subunit 6; Required for normal Golgi function.
   
 0.994
Cog4
Component of oligomeric golgi complex 4 (Predicted).
   
 0.994
Cog7
Conserved oligomeric Golgi complex subunit 7; Required for normal Golgi function.
   
 0.993
Cog3
Component of oligomeric golgi complex 3.
   
 0.992
Stx16
Syntaxin 16; Belongs to the syntaxin family.
   
 
 0.878
Vps51
VPS51 GARP complex subunit.
   
 
 0.871
Stx5
Syntaxin-5; Mediates endoplasmic reticulum to Golgi transport. Together with p115/USO1 and GM130/GOLGA2, involved in vesicle tethering and fusion at the cis-Golgi membrane to maintain the stacked and inter-connected structure of the Golgi apparatus.
   
 
 0.849
Your Current Organism:
Rattus norvegicus
NCBI taxonomy Id: 10116
Other names: Buffalo rat, Norway rat, R. norvegicus, Rattus PC12 clone IS, Rattus sp. strain Wistar, Sprague-Dawley rat, Wistar rats, brown rat, laboratory rat, rat, rats, zitter rats
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